Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 AC127302.2-201ENSMUST00000215212 268 ntBASIC10.45□□□□□ -0.74
Trav8-1A0A075B641 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC10.45□□□□□ -0.74
Trav8-1A0A075B641 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav8-1A0A075B641 Gm7729-201ENSMUST00000050143 801 ntBASIC10.45□□□□□ -0.74
Trav8-1A0A075B641 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav8-1A0A075B641 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav8-1A0A075B641 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav8-1A0A075B641 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Trav8-1A0A075B641 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav8-1A0A075B641 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC10.45□□□□□ -0.74
Trav8-1A0A075B641 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav8-1A0A075B641 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav8-1A0A075B641 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav8-1A0A075B641 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav8-1A0A075B641 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav8-1A0A075B641 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC10.45□□□□□ -0.74
Trav8-1A0A075B641 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav8-1A0A075B641 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav8-1A0A075B641 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav8-1A0A075B641 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav8-1A0A075B641 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav8-1A0A075B641 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Trav8-1A0A075B641 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav8-1A0A075B641 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav8-1A0A075B641 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav8-1A0A075B641 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav8-1A0A075B641 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC10.44□□□□□ -0.74
Trav8-1A0A075B641 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav8-1A0A075B641 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC10.44□□□□□ -0.74
Trav8-1A0A075B641 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav8-1A0A075B641 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav8-1A0A075B641 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav8-1A0A075B641 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav8-1A0A075B641 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav8-1A0A075B641 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav8-1A0A075B641 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav8-1A0A075B641 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav8-1A0A075B641 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav8-1A0A075B641 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav8-1A0A075B641 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav8-1A0A075B641 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Trav8-1A0A075B641 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav8-1A0A075B641 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Trav8-1A0A075B641 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav8-1A0A075B641 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav8-1A0A075B641 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
Trav8-1A0A075B641 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC10.44□□□□□ -0.74
Trav8-1A0A075B641 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC10.44□□□□□ -0.74
Trav8-1A0A075B641 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Trav8-1A0A075B641 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Trav8-1A0A075B641 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav8-1A0A075B641 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav8-1A0A075B641 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC10.44□□□□□ -0.74
Trav8-1A0A075B641 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Trav8-1A0A075B641 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Trav8-1A0A075B641 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Trav8-1A0A075B641 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav8-1A0A075B641 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC10.44□□□□□ -0.74
Trav8-1A0A075B641 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav8-1A0A075B641 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC10.44□□□□□ -0.74
Trav8-1A0A075B641 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav8-1A0A075B641 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav8-1A0A075B641 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav8-1A0A075B641 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav8-1A0A075B641 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav8-1A0A075B641 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav8-1A0A075B641 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC10.44□□□□□ -0.74
Trav8-1A0A075B641 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav8-1A0A075B641 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Trav8-1A0A075B641 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav8-1A0A075B641 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav8-1A0A075B641 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav8-1A0A075B641 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav8-1A0A075B641 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav8-1A0A075B641 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav8-1A0A075B641 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav8-1A0A075B641 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav8-1A0A075B641 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Trav8-1A0A075B641 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav8-1A0A075B641 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav8-1A0A075B641 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav8-1A0A075B641 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav8-1A0A075B641 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav8-1A0A075B641 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav8-1A0A075B641 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav8-1A0A075B641 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav8-1A0A075B641 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav8-1A0A075B641 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav8-1A0A075B641 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC10.43□□□□□ -0.74
Trav8-1A0A075B641 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC10.43□□□□□ -0.74
Trav8-1A0A075B641 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC10.43□□□□□ -0.74
Trav8-1A0A075B641 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav8-1A0A075B641 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC10.43□□□□□ -0.74
Trav8-1A0A075B641 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC10.43□□□□□ -0.74
Trav8-1A0A075B641 Mir5130-201ENSMUST00000175160 84 ntBASIC10.43□□□□□ -0.74
Trav8-1A0A075B641 Gm22240-201ENSMUST00000175225 82 ntBASIC10.43□□□□□ -0.74
Trav8-1A0A075B641 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Trav8-1A0A075B641 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC10.43□□□□□ -0.74
Trav8-1A0A075B641 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC10.43□□□□□ -0.74
Trav8-1A0A075B641 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC10.43□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms