Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sec61a2Q9JLR1 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Sec61a2Q9JLR1 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.74■□□□□ 0.75
Sec61a2Q9JLR1 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sec61a2Q9JLR1 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sec61a2Q9JLR1 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sec61a2Q9JLR1 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sec61a2Q9JLR1 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.73■□□□□ 0.75
Sec61a2Q9JLR1 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Sec61a2Q9JLR1 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.73■□□□□ 0.75
Sec61a2Q9JLR1 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.73■□□□□ 0.75
Sec61a2Q9JLR1 Gm16437-201ENSMUST00000025669 507 ntBASIC19.73■□□□□ 0.75
Sec61a2Q9JLR1 Gm9806-201ENSMUST00000051080 552 ntBASIC19.73■□□□□ 0.75
Sec61a2Q9JLR1 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sec61a2Q9JLR1 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sec61a2Q9JLR1 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sec61a2Q9JLR1 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.73■□□□□ 0.75
Sec61a2Q9JLR1 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sec61a2Q9JLR1 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sec61a2Q9JLR1 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sec61a2Q9JLR1 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sec61a2Q9JLR1 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Sec61a2Q9JLR1 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Sec61a2Q9JLR1 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Sec61a2Q9JLR1 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sec61a2Q9JLR1 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sec61a2Q9JLR1 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sec61a2Q9JLR1 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sec61a2Q9JLR1 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.71■□□□□ 0.75
Sec61a2Q9JLR1 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.71■□□□□ 0.75
Sec61a2Q9JLR1 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sec61a2Q9JLR1 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.71■□□□□ 0.75
Sec61a2Q9JLR1 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.74
Sec61a2Q9JLR1 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.7■□□□□ 0.74
Sec61a2Q9JLR1 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sec61a2Q9JLR1 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sec61a2Q9JLR1 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sec61a2Q9JLR1 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Sec61a2Q9JLR1 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.7■□□□□ 0.74
Sec61a2Q9JLR1 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Sec61a2Q9JLR1 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sec61a2Q9JLR1 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.69■□□□□ 0.74
Sec61a2Q9JLR1 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Sec61a2Q9JLR1 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sec61a2Q9JLR1 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sec61a2Q9JLR1 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.69■□□□□ 0.74
Sec61a2Q9JLR1 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Sec61a2Q9JLR1 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sec61a2Q9JLR1 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Sec61a2Q9JLR1 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sec61a2Q9JLR1 Mir6538-201ENSMUST00000183713 110 ntBASIC19.68■□□□□ 0.74
Sec61a2Q9JLR1 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.68■□□□□ 0.74
Sec61a2Q9JLR1 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sec61a2Q9JLR1 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sec61a2Q9JLR1 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Sec61a2Q9JLR1 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Sec61a2Q9JLR1 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sec61a2Q9JLR1 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Sec61a2Q9JLR1 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sec61a2Q9JLR1 Gm11687-201ENSMUST00000118911 886 ntBASIC19.67■□□□□ 0.74
Sec61a2Q9JLR1 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sec61a2Q9JLR1 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sec61a2Q9JLR1 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sec61a2Q9JLR1 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sec61a2Q9JLR1 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sec61a2Q9JLR1 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sec61a2Q9JLR1 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.66■□□□□ 0.74
Sec61a2Q9JLR1 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sec61a2Q9JLR1 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sec61a2Q9JLR1 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sec61a2Q9JLR1 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sec61a2Q9JLR1 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sec61a2Q9JLR1 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Sec61a2Q9JLR1 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sec61a2Q9JLR1 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Sec61a2Q9JLR1 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sec61a2Q9JLR1 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sec61a2Q9JLR1 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sec61a2Q9JLR1 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sec61a2Q9JLR1 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sec61a2Q9JLR1 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sec61a2Q9JLR1 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sec61a2Q9JLR1 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sec61a2Q9JLR1 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.61■□□□□ 0.73
Sec61a2Q9JLR1 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.61■□□□□ 0.73
Sec61a2Q9JLR1 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Sec61a2Q9JLR1 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sec61a2Q9JLR1 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Sec61a2Q9JLR1 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sec61a2Q9JLR1 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sec61a2Q9JLR1 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.6■□□□□ 0.73
Sec61a2Q9JLR1 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Sec61a2Q9JLR1 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Sec61a2Q9JLR1 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Sec61a2Q9JLR1 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sec61a2Q9JLR1 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sec61a2Q9JLR1 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sec61a2Q9JLR1 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sec61a2Q9JLR1 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Sec61a2Q9JLR1 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms