Protein–RNA interactions for Protein: Q9EPL6

Mmp1b, Interstitial collagenase B, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp1bQ9EPL6 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
Mmp1bQ9EPL6 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp1bQ9EPL6 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Mmp1bQ9EPL6 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Mmp1bQ9EPL6 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp1bQ9EPL6 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp1bQ9EPL6 Gm37136-201ENSMUST00000194368 194 ntBASIC19.41■□□□□ 0.7
Mmp1bQ9EPL6 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp1bQ9EPL6 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.41■□□□□ 0.7
Mmp1bQ9EPL6 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp1bQ9EPL6 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp1bQ9EPL6 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.4■□□□□ 0.7
Mmp1bQ9EPL6 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mmp1bQ9EPL6 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mmp1bQ9EPL6 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mmp1bQ9EPL6 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Mmp1bQ9EPL6 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mmp1bQ9EPL6 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mmp1bQ9EPL6 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.39■□□□□ 0.69
Mmp1bQ9EPL6 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mmp1bQ9EPL6 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Mmp1bQ9EPL6 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Mmp1bQ9EPL6 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Mmp1bQ9EPL6 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.37■□□□□ 0.69
Mmp1bQ9EPL6 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Mmp1bQ9EPL6 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Mmp1bQ9EPL6 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Mmp1bQ9EPL6 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Mmp1bQ9EPL6 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Mmp1bQ9EPL6 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Mmp1bQ9EPL6 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Mmp1bQ9EPL6 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp1bQ9EPL6 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.35■□□□□ 0.69
Mmp1bQ9EPL6 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp1bQ9EPL6 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp1bQ9EPL6 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp1bQ9EPL6 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.34■□□□□ 0.69
Mmp1bQ9EPL6 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mmp1bQ9EPL6 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Mmp1bQ9EPL6 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mmp1bQ9EPL6 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mmp1bQ9EPL6 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mmp1bQ9EPL6 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Mmp1bQ9EPL6 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Mmp1bQ9EPL6 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Mmp1bQ9EPL6 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Mmp1bQ9EPL6 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Mmp1bQ9EPL6 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mmp1bQ9EPL6 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.32■□□□□ 0.68
Mmp1bQ9EPL6 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.32■□□□□ 0.68
Mmp1bQ9EPL6 Gm7432-201ENSMUST00000210343 879 ntBASIC19.32■□□□□ 0.68
Mmp1bQ9EPL6 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Mmp1bQ9EPL6 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mmp1bQ9EPL6 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mmp1bQ9EPL6 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mmp1bQ9EPL6 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mmp1bQ9EPL6 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Mmp1bQ9EPL6 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mmp1bQ9EPL6 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mmp1bQ9EPL6 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.31■□□□□ 0.68
Mmp1bQ9EPL6 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.31■□□□□ 0.68
Mmp1bQ9EPL6 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mmp1bQ9EPL6 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mmp1bQ9EPL6 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Mmp1bQ9EPL6 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.3■□□□□ 0.68
Mmp1bQ9EPL6 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mmp1bQ9EPL6 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.3■□□□□ 0.68
Mmp1bQ9EPL6 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mmp1bQ9EPL6 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Mmp1bQ9EPL6 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mmp1bQ9EPL6 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Mmp1bQ9EPL6 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.29■□□□□ 0.68
Mmp1bQ9EPL6 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mmp1bQ9EPL6 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp1bQ9EPL6 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp1bQ9EPL6 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp1bQ9EPL6 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.28■□□□□ 0.68
Mmp1bQ9EPL6 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.28■□□□□ 0.68
Mmp1bQ9EPL6 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp1bQ9EPL6 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mmp1bQ9EPL6 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Mmp1bQ9EPL6 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Mmp1bQ9EPL6 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mmp1bQ9EPL6 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Mmp1bQ9EPL6 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Mmp1bQ9EPL6 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Mmp1bQ9EPL6 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp1bQ9EPL6 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp1bQ9EPL6 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp1bQ9EPL6 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp1bQ9EPL6 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp1bQ9EPL6 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Mmp1bQ9EPL6 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp1bQ9EPL6 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Mmp1bQ9EPL6 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp1bQ9EPL6 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp1bQ9EPL6 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp1bQ9EPL6 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Mmp1bQ9EPL6 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.24■□□□□ 0.67
Mmp1bQ9EPL6 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms