Protein–RNA interactions for Protein: Q9CQE0

Rnf138, E3 ubiquitin-protein ligase RNF138, mousemouse

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf138Q9CQE0 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rnf138Q9CQE0 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.07■□□□□ 0.96
Rnf138Q9CQE0 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rnf138Q9CQE0 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rnf138Q9CQE0 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Rnf138Q9CQE0 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.06■□□□□ 0.96
Rnf138Q9CQE0 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rnf138Q9CQE0 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rnf138Q9CQE0 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rnf138Q9CQE0 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rnf138Q9CQE0 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rnf138Q9CQE0 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.04■□□□□ 0.96
Rnf138Q9CQE0 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rnf138Q9CQE0 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rnf138Q9CQE0 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rnf138Q9CQE0 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.03■□□□□ 0.96
Rnf138Q9CQE0 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rnf138Q9CQE0 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Rnf138Q9CQE0 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Rnf138Q9CQE0 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Rnf138Q9CQE0 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Rnf138Q9CQE0 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.02■□□□□ 0.96
Rnf138Q9CQE0 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Rnf138Q9CQE0 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21■□□□□ 0.95
Rnf138Q9CQE0 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
Rnf138Q9CQE0 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rnf138Q9CQE0 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rnf138Q9CQE0 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rnf138Q9CQE0 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rnf138Q9CQE0 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf138Q9CQE0 Gm13238-201ENSMUST00000117655 780 ntBASIC20.99■□□□□ 0.95
Rnf138Q9CQE0 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.99■□□□□ 0.95
Rnf138Q9CQE0 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Rnf138Q9CQE0 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.99■□□□□ 0.95
Rnf138Q9CQE0 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Rnf138Q9CQE0 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf138Q9CQE0 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rnf138Q9CQE0 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rnf138Q9CQE0 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rnf138Q9CQE0 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rnf138Q9CQE0 Gm45444-201ENSMUST00000211394 898 ntBASIC20.98■□□□□ 0.95
Rnf138Q9CQE0 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.98■□□□□ 0.95
Rnf138Q9CQE0 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rnf138Q9CQE0 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rnf138Q9CQE0 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf138Q9CQE0 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf138Q9CQE0 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf138Q9CQE0 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
Rnf138Q9CQE0 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf138Q9CQE0 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.97■□□□□ 0.95
Rnf138Q9CQE0 Gm43566-201ENSMUST00000196851 808 ntBASIC20.97■□□□□ 0.95
Rnf138Q9CQE0 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Rnf138Q9CQE0 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf138Q9CQE0 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf138Q9CQE0 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf138Q9CQE0 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf138Q9CQE0 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.95
Rnf138Q9CQE0 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.95■□□□□ 0.94
Rnf138Q9CQE0 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.95■□□□□ 0.94
Rnf138Q9CQE0 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf138Q9CQE0 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.95■□□□□ 0.94
Rnf138Q9CQE0 Gm5812-201ENSMUST00000061073 957 ntBASIC20.95■□□□□ 0.94
Rnf138Q9CQE0 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf138Q9CQE0 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rnf138Q9CQE0 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.94■□□□□ 0.94
Rnf138Q9CQE0 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf138Q9CQE0 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Rnf138Q9CQE0 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Rnf138Q9CQE0 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf138Q9CQE0 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Rnf138Q9CQE0 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.93■□□□□ 0.94
Rnf138Q9CQE0 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rnf138Q9CQE0 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rnf138Q9CQE0 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rnf138Q9CQE0 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Rnf138Q9CQE0 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.91■□□□□ 0.94
Rnf138Q9CQE0 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rnf138Q9CQE0 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rnf138Q9CQE0 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rnf138Q9CQE0 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Rnf138Q9CQE0 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.91■□□□□ 0.94
Rnf138Q9CQE0 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rnf138Q9CQE0 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Rnf138Q9CQE0 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rnf138Q9CQE0 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Rnf138Q9CQE0 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rnf138Q9CQE0 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rnf138Q9CQE0 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf138Q9CQE0 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf138Q9CQE0 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf138Q9CQE0 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.88■□□□□ 0.93
Rnf138Q9CQE0 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.88■□□□□ 0.93
Rnf138Q9CQE0 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Rnf138Q9CQE0 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf138Q9CQE0 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf138Q9CQE0 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf138Q9CQE0 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf138Q9CQE0 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rnf138Q9CQE0 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rnf138Q9CQE0 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 110.9 ms