Protein–RNA interactions for Protein: Q8R420

Abca3, ATP-binding cassette sub-family A member 3, mousemouse

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca3Q8R420 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC28,62■■■□□ 2,17
Abca3Q8R420 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC28,62■■■□□ 2,17
Abca3Q8R420 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC28,61■■■□□ 2,17
Abca3Q8R420 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC28,61■■■□□ 2,17
Abca3Q8R420 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC28,61■■■□□ 2,17
Abca3Q8R420 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC28,61■■■□□ 2,17
Abca3Q8R420 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC28,6■■■□□ 2,17
Abca3Q8R420 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC28,6■■■□□ 2,17
Abca3Q8R420 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC28,6■■■□□ 2,17
Abca3Q8R420 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC28,6■■■□□ 2,17
Abca3Q8R420 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC28,59■■■□□ 2,17
Abca3Q8R420 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC28,59■■■□□ 2,17
Abca3Q8R420 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC28,59■■■□□ 2,17
Abca3Q8R420 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC28,58■■■□□ 2,17
Abca3Q8R420 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC28,57■■■□□ 2,16
Abca3Q8R420 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC28,57■■■□□ 2,16
Abca3Q8R420 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC28,57■■■□□ 2,16
Abca3Q8R420 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC28,56■■■□□ 2,16
Abca3Q8R420 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC28,55■■■□□ 2,16
Abca3Q8R420 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC28,54■■■□□ 2,16
Abca3Q8R420 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC28,54■■■□□ 2,16
Abca3Q8R420 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC28,53■■■□□ 2,16
Abca3Q8R420 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC28,53■■■□□ 2,16
Abca3Q8R420 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC28,52■■■□□ 2,16
Abca3Q8R420 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC28,52■■■□□ 2,16
Abca3Q8R420 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC28,52■■■□□ 2,16
Abca3Q8R420 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC28,52■■■□□ 2,16
Abca3Q8R420 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC28,52■■■□□ 2,16
Abca3Q8R420 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC28,52■■■□□ 2,16
Abca3Q8R420 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC28,5■■■□□ 2,15
Abca3Q8R420 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC28,49■■■□□ 2,15
Abca3Q8R420 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC28,49■■■□□ 2,15
Abca3Q8R420 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC28,49■■■□□ 2,15
Abca3Q8R420 Gm21956-201ENSMUST00000179946 522 ntBASIC28,48■■■□□ 2,15
Abca3Q8R420 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC28,48■■■□□ 2,15
Abca3Q8R420 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC28,46■■■□□ 2,15
Abca3Q8R420 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC28,46■■■□□ 2,15
Abca3Q8R420 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC28,46■■■□□ 2,15
Abca3Q8R420 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC28,45■■■□□ 2,15
Abca3Q8R420 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC28,45■■■□□ 2,15
Abca3Q8R420 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC28,45■■■□□ 2,15
Abca3Q8R420 Etf1-202ENSMUST00000180351 108 ntBASIC28,44■■■□□ 2,14
Abca3Q8R420 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC28,44■■■□□ 2,14
Abca3Q8R420 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC28,44■■■□□ 2,14
Abca3Q8R420 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC28,43■■■□□ 2,14
Abca3Q8R420 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC28,42■■■□□ 2,14
Abca3Q8R420 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC28,42■■■□□ 2,14
Abca3Q8R420 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC28,42■■■□□ 2,14
Abca3Q8R420 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC28,41■■■□□ 2,14
Abca3Q8R420 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC28,41■■■□□ 2,14
Abca3Q8R420 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC28,41■■■□□ 2,14
Abca3Q8R420 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC28,41■■■□□ 2,14
Abca3Q8R420 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC28,41■■■□□ 2,14
Abca3Q8R420 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC28,41■■■□□ 2,14
Abca3Q8R420 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC28,41■■■□□ 2,14
Abca3Q8R420 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC28,4■■■□□ 2,14
Abca3Q8R420 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC28,4■■■□□ 2,14
Abca3Q8R420 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC28,4■■■□□ 2,14
Abca3Q8R420 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC28,4■■■□□ 2,14
Abca3Q8R420 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC28,4■■■□□ 2,14
Abca3Q8R420 Gm7199-201ENSMUST00000118327 1485 ntBASIC28,39■■■□□ 2,14
Abca3Q8R420 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC28,39■■■□□ 2,14
Abca3Q8R420 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC28,39■■■□□ 2,14
Abca3Q8R420 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC28,39■■■□□ 2,14
Abca3Q8R420 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC28,38■■■□□ 2,13
Abca3Q8R420 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC28,38■■■□□ 2,13
Abca3Q8R420 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC28,38■■■□□ 2,13
Abca3Q8R420 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC28,38■■■□□ 2,13
Abca3Q8R420 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC28,38■■■□□ 2,13
Abca3Q8R420 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC28,38■■■□□ 2,13
Abca3Q8R420 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC28,38■■■□□ 2,13
Abca3Q8R420 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC28,37■■■□□ 2,13
Abca3Q8R420 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC28,37■■■□□ 2,13
Abca3Q8R420 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC28,36■■■□□ 2,13
Abca3Q8R420 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC28,36■■■□□ 2,13
Abca3Q8R420 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC28,35■■■□□ 2,13
Abca3Q8R420 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC28,35■■■□□ 2,13
Abca3Q8R420 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC28,35■■■□□ 2,13
Abca3Q8R420 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC28,34■■■□□ 2,13
Abca3Q8R420 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC28,34■■■□□ 2,13
Abca3Q8R420 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC28,34■■■□□ 2,13
Abca3Q8R420 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC28,34■■■□□ 2,13
Abca3Q8R420 Gm16464-201ENSMUST00000117815 1095 ntBASIC28,33■■■□□ 2,13
Abca3Q8R420 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC28,33■■■□□ 2,13
Abca3Q8R420 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC28,33■■■□□ 2,13
Abca3Q8R420 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC28,33■■■□□ 2,13
Abca3Q8R420 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC28,32■■■□□ 2,12
Abca3Q8R420 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC28,32■■■□□ 2,12
Abca3Q8R420 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC28,32■■■□□ 2,12
Abca3Q8R420 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC28,32■■■□□ 2,12
Abca3Q8R420 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC28,32■■■□□ 2,12
Abca3Q8R420 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC28,32■■■□□ 2,12
Abca3Q8R420 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC28,32■■■□□ 2,12
Abca3Q8R420 Gm13241-201ENSMUST00000094493 780 ntBASIC28,31■■■□□ 2,12
Abca3Q8R420 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC28,31■■■□□ 2,12
Abca3Q8R420 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC28,31■■■□□ 2,12
Abca3Q8R420 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC28,31■■■□□ 2,12
Abca3Q8R420 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC28,29■■■□□ 2,12
Abca3Q8R420 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC28,29■■■□□ 2,12
Abca3Q8R420 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC28,29■■■□□ 2,12
Retrieved 100 of 76,532 protein–RNA pairs in 21,1 ms