Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Nudcd3Q8R1N4 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC22.05■■□□□ 1.12
Nudcd3Q8R1N4 Gm13042-201ENSMUST00000119244 1955 ntBASIC22.05■■□□□ 1.12
Nudcd3Q8R1N4 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC22.05■■□□□ 1.12
Nudcd3Q8R1N4 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC22.04■■□□□ 1.12
Nudcd3Q8R1N4 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Nudcd3Q8R1N4 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC22.04■■□□□ 1.12
Nudcd3Q8R1N4 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Nudcd3Q8R1N4 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Nudcd3Q8R1N4 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Nudcd3Q8R1N4 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Nudcd3Q8R1N4 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Nudcd3Q8R1N4 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Nudcd3Q8R1N4 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Nudcd3Q8R1N4 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC22.02■■□□□ 1.12
Nudcd3Q8R1N4 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Nudcd3Q8R1N4 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Nudcd3Q8R1N4 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
Nudcd3Q8R1N4 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Nudcd3Q8R1N4 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Nudcd3Q8R1N4 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Nudcd3Q8R1N4 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Nudcd3Q8R1N4 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC22.01■■□□□ 1.11
Nudcd3Q8R1N4 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Nudcd3Q8R1N4 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Nudcd3Q8R1N4 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Nudcd3Q8R1N4 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Nudcd3Q8R1N4 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC22■■□□□ 1.11
Nudcd3Q8R1N4 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Nudcd3Q8R1N4 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Nudcd3Q8R1N4 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Nudcd3Q8R1N4 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.99■■□□□ 1.11
Nudcd3Q8R1N4 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.99■■□□□ 1.11
Nudcd3Q8R1N4 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Nudcd3Q8R1N4 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Nudcd3Q8R1N4 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Nudcd3Q8R1N4 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
Nudcd3Q8R1N4 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Nudcd3Q8R1N4 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Nudcd3Q8R1N4 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Nudcd3Q8R1N4 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Nudcd3Q8R1N4 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Nudcd3Q8R1N4 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.97■■□□□ 1.11
Nudcd3Q8R1N4 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Nudcd3Q8R1N4 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Nudcd3Q8R1N4 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Nudcd3Q8R1N4 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Nudcd3Q8R1N4 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.96■■□□□ 1.11
Nudcd3Q8R1N4 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Nudcd3Q8R1N4 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Nudcd3Q8R1N4 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Nudcd3Q8R1N4 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Nudcd3Q8R1N4 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
Nudcd3Q8R1N4 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Nudcd3Q8R1N4 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.95■■□□□ 1.1
Nudcd3Q8R1N4 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Nudcd3Q8R1N4 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Nudcd3Q8R1N4 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.94■■□□□ 1.1
Nudcd3Q8R1N4 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Nudcd3Q8R1N4 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Nudcd3Q8R1N4 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Nudcd3Q8R1N4 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
Nudcd3Q8R1N4 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.93■■□□□ 1.1
Nudcd3Q8R1N4 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.93■■□□□ 1.1
Nudcd3Q8R1N4 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.92■■□□□ 1.1
Nudcd3Q8R1N4 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Nudcd3Q8R1N4 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.92■■□□□ 1.1
Nudcd3Q8R1N4 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Nudcd3Q8R1N4 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Nudcd3Q8R1N4 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nudcd3Q8R1N4 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nudcd3Q8R1N4 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nudcd3Q8R1N4 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nudcd3Q8R1N4 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nudcd3Q8R1N4 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.9■■□□□ 1.1
Nudcd3Q8R1N4 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Nudcd3Q8R1N4 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nudcd3Q8R1N4 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Nudcd3Q8R1N4 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
Nudcd3Q8R1N4 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.89■■□□□ 1.09
Nudcd3Q8R1N4 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Nudcd3Q8R1N4 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Nudcd3Q8R1N4 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Nudcd3Q8R1N4 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Nudcd3Q8R1N4 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Nudcd3Q8R1N4 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Nudcd3Q8R1N4 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Nudcd3Q8R1N4 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Nudcd3Q8R1N4 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Nudcd3Q8R1N4 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.88■■□□□ 1.09
Nudcd3Q8R1N4 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Nudcd3Q8R1N4 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Nudcd3Q8R1N4 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.87■■□□□ 1.09
Nudcd3Q8R1N4 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.87■■□□□ 1.09
Nudcd3Q8R1N4 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nudcd3Q8R1N4 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Nudcd3Q8R1N4 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nudcd3Q8R1N4 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Nudcd3Q8R1N4 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nudcd3Q8R1N4 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms