Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Ddx54Q8K4L0 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC29.81■■■□□ 2.36
Ddx54Q8K4L0 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC29.8■■■□□ 2.36
Ddx54Q8K4L0 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC29.8■■■□□ 2.36
Ddx54Q8K4L0 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Ddx54Q8K4L0 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
Ddx54Q8K4L0 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Ddx54Q8K4L0 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
Ddx54Q8K4L0 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC29.78■■■□□ 2.36
Ddx54Q8K4L0 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
Ddx54Q8K4L0 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC29.78■■■□□ 2.36
Ddx54Q8K4L0 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC29.77■■■□□ 2.36
Ddx54Q8K4L0 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
Ddx54Q8K4L0 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Ddx54Q8K4L0 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
Ddx54Q8K4L0 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC29.76■■■□□ 2.36
Ddx54Q8K4L0 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
Ddx54Q8K4L0 Gm16464-201ENSMUST00000117815 1095 ntBASIC29.76■■■□□ 2.35
Ddx54Q8K4L0 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
Ddx54Q8K4L0 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Ddx54Q8K4L0 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Ddx54Q8K4L0 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC29.74■■■□□ 2.35
Ddx54Q8K4L0 Gm22238-201ENSMUST00000175222 88 ntBASIC29.74■■■□□ 2.35
Ddx54Q8K4L0 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Ddx54Q8K4L0 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Ddx54Q8K4L0 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
Ddx54Q8K4L0 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Ddx54Q8K4L0 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
Ddx54Q8K4L0 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC29.73■■■□□ 2.35
Ddx54Q8K4L0 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Ddx54Q8K4L0 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC29.72■■■□□ 2.35
Ddx54Q8K4L0 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
Ddx54Q8K4L0 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC29.71■■■□□ 2.35
Ddx54Q8K4L0 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Ddx54Q8K4L0 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
Ddx54Q8K4L0 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC29.71■■■□□ 2.35
Ddx54Q8K4L0 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
Ddx54Q8K4L0 Appbp2os-202ENSMUST00000206972 447 ntBASIC29.7■■■□□ 2.35
Ddx54Q8K4L0 Slc35b2-207ENSMUST00000226086 850 ntBASIC29.7■■■□□ 2.35
Ddx54Q8K4L0 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC29.7■■■□□ 2.34
Ddx54Q8K4L0 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Ddx54Q8K4L0 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Ddx54Q8K4L0 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
Ddx54Q8K4L0 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC29.68■■■□□ 2.34
Ddx54Q8K4L0 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC29.67■■■□□ 2.34
Ddx54Q8K4L0 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Ddx54Q8K4L0 AC140930.3-201ENSMUST00000222935 274 ntBASIC29.66■■■□□ 2.34
Ddx54Q8K4L0 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Ddx54Q8K4L0 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Ddx54Q8K4L0 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Ddx54Q8K4L0 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC29.65■■■□□ 2.34
Ddx54Q8K4L0 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
Ddx54Q8K4L0 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
Ddx54Q8K4L0 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC29.64■■■□□ 2.34
Ddx54Q8K4L0 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
Ddx54Q8K4L0 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
Ddx54Q8K4L0 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC29.63■■■□□ 2.33
Ddx54Q8K4L0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC29.63■■■□□ 2.33
Ddx54Q8K4L0 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC29.62■■■□□ 2.33
Ddx54Q8K4L0 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC29.62■■■□□ 2.33
Ddx54Q8K4L0 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Ddx54Q8K4L0 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC29.61■■■□□ 2.33
Ddx54Q8K4L0 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC29.61■■■□□ 2.33
Ddx54Q8K4L0 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
Ddx54Q8K4L0 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC29.6■■■□□ 2.33
Ddx54Q8K4L0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC29.6■■■□□ 2.33
Ddx54Q8K4L0 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
Ddx54Q8K4L0 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC29.59■■■□□ 2.33
Ddx54Q8K4L0 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
Ddx54Q8K4L0 AC153504.1-201ENSMUST00000218379 2290 ntBASIC29.57■■■□□ 2.32
Ddx54Q8K4L0 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Ddx54Q8K4L0 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC29.57■■■□□ 2.32
Ddx54Q8K4L0 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
Ddx54Q8K4L0 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
Ddx54Q8K4L0 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Ddx54Q8K4L0 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
Ddx54Q8K4L0 Gm12821-201ENSMUST00000120022 600 ntBASIC29.56■■■□□ 2.32
Ddx54Q8K4L0 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
Ddx54Q8K4L0 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC29.55■■■□□ 2.32
Ddx54Q8K4L0 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Ddx54Q8K4L0 Gm27454-201ENSMUST00000185090 204 ntBASIC29.54■■■□□ 2.32
Ddx54Q8K4L0 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Ddx54Q8K4L0 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Ddx54Q8K4L0 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Ddx54Q8K4L0 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Ddx54Q8K4L0 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC29.53■■■□□ 2.32
Ddx54Q8K4L0 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Ddx54Q8K4L0 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Ddx54Q8K4L0 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Ddx54Q8K4L0 Gm45417-201ENSMUST00000209533 758 ntBASIC29.52■■■□□ 2.32
Ddx54Q8K4L0 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC29.52■■■□□ 2.32
Ddx54Q8K4L0 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Ddx54Q8K4L0 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
Ddx54Q8K4L0 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC29.51■■■□□ 2.32
Ddx54Q8K4L0 Gm12922-201ENSMUST00000120626 809 ntBASIC29.51■■■□□ 2.31
Ddx54Q8K4L0 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC29.51■■■□□ 2.31
Ddx54Q8K4L0 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
Ddx54Q8K4L0 Gm40881-201ENSMUST00000223397 166 ntBASIC29.51■■■□□ 2.31
Ddx54Q8K4L0 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC29.51■■■□□ 2.31
Ddx54Q8K4L0 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC29.51■■■□□ 2.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms