Protein–RNA interactions for Protein: Q8K3Y3

Lin28a, Protein lin-28 homolog A, mousemouse

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28aQ8K3Y3 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lin28aQ8K3Y3 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Lin28aQ8K3Y3 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.66■□□□□ 0.9
Lin28aQ8K3Y3 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Lin28aQ8K3Y3 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lin28aQ8K3Y3 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
Lin28aQ8K3Y3 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
Lin28aQ8K3Y3 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lin28aQ8K3Y3 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Lin28aQ8K3Y3 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.64■□□□□ 0.89
Lin28aQ8K3Y3 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lin28aQ8K3Y3 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lin28aQ8K3Y3 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lin28aQ8K3Y3 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lin28aQ8K3Y3 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lin28aQ8K3Y3 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lin28aQ8K3Y3 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lin28aQ8K3Y3 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Lin28aQ8K3Y3 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lin28aQ8K3Y3 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lin28aQ8K3Y3 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Lin28aQ8K3Y3 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Lin28aQ8K3Y3 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lin28aQ8K3Y3 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lin28aQ8K3Y3 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lin28aQ8K3Y3 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lin28aQ8K3Y3 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lin28aQ8K3Y3 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Lin28aQ8K3Y3 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lin28aQ8K3Y3 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Lin28aQ8K3Y3 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Lin28aQ8K3Y3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Lin28aQ8K3Y3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Lin28aQ8K3Y3 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lin28aQ8K3Y3 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lin28aQ8K3Y3 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
Lin28aQ8K3Y3 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Lin28aQ8K3Y3 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lin28aQ8K3Y3 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lin28aQ8K3Y3 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Lin28aQ8K3Y3 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
Lin28aQ8K3Y3 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lin28aQ8K3Y3 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lin28aQ8K3Y3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lin28aQ8K3Y3 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lin28aQ8K3Y3 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lin28aQ8K3Y3 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lin28aQ8K3Y3 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lin28aQ8K3Y3 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lin28aQ8K3Y3 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.58■□□□□ 0.89
Lin28aQ8K3Y3 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lin28aQ8K3Y3 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Lin28aQ8K3Y3 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Lin28aQ8K3Y3 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.57■□□□□ 0.88
Lin28aQ8K3Y3 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Lin28aQ8K3Y3 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.57■□□□□ 0.88
Lin28aQ8K3Y3 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.57■□□□□ 0.88
Lin28aQ8K3Y3 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Lin28aQ8K3Y3 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Lin28aQ8K3Y3 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lin28aQ8K3Y3 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lin28aQ8K3Y3 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lin28aQ8K3Y3 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lin28aQ8K3Y3 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lin28aQ8K3Y3 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Lin28aQ8K3Y3 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lin28aQ8K3Y3 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lin28aQ8K3Y3 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Lin28aQ8K3Y3 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lin28aQ8K3Y3 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lin28aQ8K3Y3 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Lin28aQ8K3Y3 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.55■□□□□ 0.88
Lin28aQ8K3Y3 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lin28aQ8K3Y3 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lin28aQ8K3Y3 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lin28aQ8K3Y3 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lin28aQ8K3Y3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Lin28aQ8K3Y3 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lin28aQ8K3Y3 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lin28aQ8K3Y3 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lin28aQ8K3Y3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Lin28aQ8K3Y3 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.53■□□□□ 0.88
Lin28aQ8K3Y3 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lin28aQ8K3Y3 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Lin28aQ8K3Y3 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lin28aQ8K3Y3 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lin28aQ8K3Y3 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lin28aQ8K3Y3 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Lin28aQ8K3Y3 Gm5921-201ENSMUST00000075898 882 ntBASIC20.52■□□□□ 0.88
Lin28aQ8K3Y3 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Lin28aQ8K3Y3 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.51■□□□□ 0.87
Lin28aQ8K3Y3 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lin28aQ8K3Y3 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.51■□□□□ 0.87
Lin28aQ8K3Y3 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lin28aQ8K3Y3 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Lin28aQ8K3Y3 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Lin28aQ8K3Y3 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Lin28aQ8K3Y3 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.49■□□□□ 0.87
Lin28aQ8K3Y3 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Lin28aQ8K3Y3 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 368 ms