Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ShfQ8CG80 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.76■□□□□ 0.75
ShfQ8CG80 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
ShfQ8CG80 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ShfQ8CG80 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ShfQ8CG80 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ShfQ8CG80 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ShfQ8CG80 Gm22567-201ENSMUST00000175542 342 ntBASIC19.75■□□□□ 0.75
ShfQ8CG80 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ShfQ8CG80 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ShfQ8CG80 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ShfQ8CG80 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ShfQ8CG80 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ShfQ8CG80 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ShfQ8CG80 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.74■□□□□ 0.75
ShfQ8CG80 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ShfQ8CG80 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
ShfQ8CG80 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ShfQ8CG80 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ShfQ8CG80 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ShfQ8CG80 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ShfQ8CG80 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
ShfQ8CG80 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ShfQ8CG80 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ShfQ8CG80 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ShfQ8CG80 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ShfQ8CG80 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ShfQ8CG80 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.73■□□□□ 0.75
ShfQ8CG80 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ShfQ8CG80 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
ShfQ8CG80 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
ShfQ8CG80 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ShfQ8CG80 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ShfQ8CG80 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
ShfQ8CG80 Terc-201ENSMUST00000082862 423 ntBASIC19.72■□□□□ 0.75
ShfQ8CG80 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ShfQ8CG80 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ShfQ8CG80 Gm45364-201ENSMUST00000210883 159 ntBASIC19.71■□□□□ 0.75
ShfQ8CG80 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ShfQ8CG80 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ShfQ8CG80 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.7■□□□□ 0.74
ShfQ8CG80 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ShfQ8CG80 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.7■□□□□ 0.74
ShfQ8CG80 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
ShfQ8CG80 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.7■□□□□ 0.74
ShfQ8CG80 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ShfQ8CG80 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
ShfQ8CG80 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
ShfQ8CG80 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
ShfQ8CG80 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ShfQ8CG80 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ShfQ8CG80 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ShfQ8CG80 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
ShfQ8CG80 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.69■□□□□ 0.74
ShfQ8CG80 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ShfQ8CG80 Gm7432-201ENSMUST00000210343 879 ntBASIC19.68■□□□□ 0.74
ShfQ8CG80 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ShfQ8CG80 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ShfQ8CG80 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
ShfQ8CG80 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ShfQ8CG80 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ShfQ8CG80 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ShfQ8CG80 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
ShfQ8CG80 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ShfQ8CG80 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.67■□□□□ 0.74
ShfQ8CG80 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ShfQ8CG80 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ShfQ8CG80 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ShfQ8CG80 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ShfQ8CG80 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
ShfQ8CG80 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ShfQ8CG80 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ShfQ8CG80 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
ShfQ8CG80 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ShfQ8CG80 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.66■□□□□ 0.74
ShfQ8CG80 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ShfQ8CG80 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.66■□□□□ 0.74
ShfQ8CG80 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ShfQ8CG80 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.65■□□□□ 0.74
ShfQ8CG80 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ShfQ8CG80 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.65■□□□□ 0.74
ShfQ8CG80 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ShfQ8CG80 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ShfQ8CG80 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
ShfQ8CG80 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.64■□□□□ 0.73
ShfQ8CG80 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
ShfQ8CG80 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.64■□□□□ 0.73
ShfQ8CG80 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
ShfQ8CG80 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.63■□□□□ 0.73
ShfQ8CG80 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
ShfQ8CG80 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ShfQ8CG80 Gm11599-201ENSMUST00000118720 878 ntBASIC19.62■□□□□ 0.73
ShfQ8CG80 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ShfQ8CG80 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ShfQ8CG80 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ShfQ8CG80 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
ShfQ8CG80 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ShfQ8CG80 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
ShfQ8CG80 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ShfQ8CG80 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms