Protein–RNA interactions for Protein: Q8C393

Zim1, Zinc finger, imprinted 1, mousemouse

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zim1Q8C393 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.46■□□□□ 0.55
Zim1Q8C393 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Zim1Q8C393 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Zim1Q8C393 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Zim1Q8C393 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Zim1Q8C393 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.46■□□□□ 0.54
Zim1Q8C393 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.45■□□□□ 0.54
Zim1Q8C393 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Zim1Q8C393 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.45■□□□□ 0.54
Zim1Q8C393 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.45■□□□□ 0.54
Zim1Q8C393 Gm4799-201ENSMUST00000095396 657 ntBASIC18.45■□□□□ 0.54
Zim1Q8C393 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Zim1Q8C393 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Zim1Q8C393 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Zim1Q8C393 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.44■□□□□ 0.54
Zim1Q8C393 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Zim1Q8C393 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Zim1Q8C393 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Zim1Q8C393 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Zim1Q8C393 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Zim1Q8C393 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Zim1Q8C393 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Zim1Q8C393 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Zim1Q8C393 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.43■□□□□ 0.54
Zim1Q8C393 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Zim1Q8C393 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Zim1Q8C393 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
Zim1Q8C393 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Zim1Q8C393 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Zim1Q8C393 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Zim1Q8C393 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Zim1Q8C393 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Zim1Q8C393 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Zim1Q8C393 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.42■□□□□ 0.54
Zim1Q8C393 Gm6311-201ENSMUST00000073790 878 ntBASIC18.42■□□□□ 0.54
Zim1Q8C393 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Zim1Q8C393 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Zim1Q8C393 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Zim1Q8C393 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Zim1Q8C393 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Zim1Q8C393 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Zim1Q8C393 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Zim1Q8C393 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Zim1Q8C393 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Zim1Q8C393 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Zim1Q8C393 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Zim1Q8C393 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Zim1Q8C393 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Zim1Q8C393 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Zim1Q8C393 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Zim1Q8C393 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Zim1Q8C393 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Zim1Q8C393 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Zim1Q8C393 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Zim1Q8C393 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Zim1Q8C393 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Zim1Q8C393 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Zim1Q8C393 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Zim1Q8C393 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Zim1Q8C393 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Zim1Q8C393 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Zim1Q8C393 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Zim1Q8C393 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Zim1Q8C393 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Zim1Q8C393 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Zim1Q8C393 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Zim1Q8C393 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Zim1Q8C393 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Zim1Q8C393 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Zim1Q8C393 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Zim1Q8C393 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Zim1Q8C393 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Zim1Q8C393 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Zim1Q8C393 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Zim1Q8C393 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Zim1Q8C393 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.36■□□□□ 0.53
Zim1Q8C393 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Zim1Q8C393 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Zim1Q8C393 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Zim1Q8C393 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Zim1Q8C393 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Zim1Q8C393 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Zim1Q8C393 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Zim1Q8C393 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Zim1Q8C393 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Zim1Q8C393 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Zim1Q8C393 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Zim1Q8C393 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.34■□□□□ 0.53
Zim1Q8C393 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Zim1Q8C393 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Zim1Q8C393 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.34■□□□□ 0.53
Zim1Q8C393 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Zim1Q8C393 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Zim1Q8C393 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.33■□□□□ 0.52
Zim1Q8C393 Mir3960-201ENSMUST00000198213 73 ntBASIC18.33■□□□□ 0.52
Zim1Q8C393 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC18.33■□□□□ 0.52
Zim1Q8C393 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Zim1Q8C393 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Zim1Q8C393 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Zim1Q8C393 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms