Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vps9d1Q8C190 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vps9d1Q8C190 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vps9d1Q8C190 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.56■□□□□ 0.88
Vps9d1Q8C190 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vps9d1Q8C190 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vps9d1Q8C190 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Vps9d1Q8C190 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vps9d1Q8C190 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Vps9d1Q8C190 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vps9d1Q8C190 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Vps9d1Q8C190 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.55■□□□□ 0.88
Vps9d1Q8C190 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vps9d1Q8C190 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vps9d1Q8C190 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vps9d1Q8C190 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vps9d1Q8C190 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vps9d1Q8C190 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Vps9d1Q8C190 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vps9d1Q8C190 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vps9d1Q8C190 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Vps9d1Q8C190 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Vps9d1Q8C190 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Vps9d1Q8C190 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Vps9d1Q8C190 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Vps9d1Q8C190 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Vps9d1Q8C190 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Vps9d1Q8C190 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Vps9d1Q8C190 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vps9d1Q8C190 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vps9d1Q8C190 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Vps9d1Q8C190 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Vps9d1Q8C190 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Vps9d1Q8C190 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vps9d1Q8C190 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Vps9d1Q8C190 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Vps9d1Q8C190 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vps9d1Q8C190 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vps9d1Q8C190 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Vps9d1Q8C190 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.5■□□□□ 0.87
Vps9d1Q8C190 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.49■□□□□ 0.87
Vps9d1Q8C190 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vps9d1Q8C190 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vps9d1Q8C190 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Vps9d1Q8C190 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Vps9d1Q8C190 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.48■□□□□ 0.87
Vps9d1Q8C190 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vps9d1Q8C190 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vps9d1Q8C190 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vps9d1Q8C190 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vps9d1Q8C190 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vps9d1Q8C190 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Vps9d1Q8C190 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.47■□□□□ 0.87
Vps9d1Q8C190 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vps9d1Q8C190 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vps9d1Q8C190 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Vps9d1Q8C190 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Vps9d1Q8C190 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vps9d1Q8C190 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vps9d1Q8C190 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vps9d1Q8C190 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.46■□□□□ 0.87
Vps9d1Q8C190 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.46■□□□□ 0.87
Vps9d1Q8C190 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vps9d1Q8C190 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.46■□□□□ 0.87
Vps9d1Q8C190 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vps9d1Q8C190 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Vps9d1Q8C190 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
Vps9d1Q8C190 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vps9d1Q8C190 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vps9d1Q8C190 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vps9d1Q8C190 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vps9d1Q8C190 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Vps9d1Q8C190 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vps9d1Q8C190 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Vps9d1Q8C190 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vps9d1Q8C190 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vps9d1Q8C190 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.43■□□□□ 0.86
Vps9d1Q8C190 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vps9d1Q8C190 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Vps9d1Q8C190 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Vps9d1Q8C190 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps9d1Q8C190 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps9d1Q8C190 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps9d1Q8C190 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps9d1Q8C190 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Vps9d1Q8C190 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.41■□□□□ 0.86
Vps9d1Q8C190 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vps9d1Q8C190 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vps9d1Q8C190 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Vps9d1Q8C190 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.41■□□□□ 0.86
Vps9d1Q8C190 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vps9d1Q8C190 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
Vps9d1Q8C190 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vps9d1Q8C190 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Vps9d1Q8C190 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vps9d1Q8C190 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Vps9d1Q8C190 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Vps9d1Q8C190 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.39■□□□□ 0.85
Vps9d1Q8C190 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.39■□□□□ 0.85
Vps9d1Q8C190 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms