Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ube3dQ8BX13 Gm27502-201ENSMUST00000183495 199 ntBASIC19.54■□□□□ 0.72
Ube3dQ8BX13 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.54■□□□□ 0.72
Ube3dQ8BX13 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ube3dQ8BX13 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ube3dQ8BX13 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ube3dQ8BX13 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ube3dQ8BX13 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Ube3dQ8BX13 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ube3dQ8BX13 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ube3dQ8BX13 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.53■□□□□ 0.72
Ube3dQ8BX13 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Ube3dQ8BX13 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ube3dQ8BX13 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Ube3dQ8BX13 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ube3dQ8BX13 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ube3dQ8BX13 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ube3dQ8BX13 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
Ube3dQ8BX13 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.52■□□□□ 0.71
Ube3dQ8BX13 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ube3dQ8BX13 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ube3dQ8BX13 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Ube3dQ8BX13 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Ube3dQ8BX13 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ube3dQ8BX13 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Ube3dQ8BX13 Terc-201ENSMUST00000082862 423 ntBASIC19.51■□□□□ 0.71
Ube3dQ8BX13 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Ube3dQ8BX13 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Ube3dQ8BX13 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ube3dQ8BX13 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ube3dQ8BX13 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ube3dQ8BX13 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ube3dQ8BX13 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Ube3dQ8BX13 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.5■□□□□ 0.71
Ube3dQ8BX13 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ube3dQ8BX13 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ube3dQ8BX13 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ube3dQ8BX13 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ube3dQ8BX13 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ube3dQ8BX13 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ube3dQ8BX13 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ube3dQ8BX13 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ube3dQ8BX13 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ube3dQ8BX13 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ube3dQ8BX13 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ube3dQ8BX13 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.48■□□□□ 0.71
Ube3dQ8BX13 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ube3dQ8BX13 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ube3dQ8BX13 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ube3dQ8BX13 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ube3dQ8BX13 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ube3dQ8BX13 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ube3dQ8BX13 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ube3dQ8BX13 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ube3dQ8BX13 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ube3dQ8BX13 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ube3dQ8BX13 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.46■□□□□ 0.71
Ube3dQ8BX13 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ube3dQ8BX13 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.46■□□□□ 0.71
Ube3dQ8BX13 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ube3dQ8BX13 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ube3dQ8BX13 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ube3dQ8BX13 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ube3dQ8BX13 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ube3dQ8BX13 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Ube3dQ8BX13 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ube3dQ8BX13 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.45■□□□□ 0.7
Ube3dQ8BX13 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ube3dQ8BX13 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.45■□□□□ 0.7
Ube3dQ8BX13 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ube3dQ8BX13 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ube3dQ8BX13 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.44■□□□□ 0.7
Ube3dQ8BX13 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ube3dQ8BX13 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ube3dQ8BX13 Gm7332-201ENSMUST00000118351 454 ntBASIC19.44■□□□□ 0.7
Ube3dQ8BX13 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.44■□□□□ 0.7
Ube3dQ8BX13 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ube3dQ8BX13 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ube3dQ8BX13 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ube3dQ8BX13 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ube3dQ8BX13 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ube3dQ8BX13 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ube3dQ8BX13 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ube3dQ8BX13 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ube3dQ8BX13 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ube3dQ8BX13 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ube3dQ8BX13 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ube3dQ8BX13 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.43■□□□□ 0.7
Ube3dQ8BX13 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ube3dQ8BX13 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ube3dQ8BX13 Gm14523-201ENSMUST00000117260 558 ntBASIC19.42■□□□□ 0.7
Ube3dQ8BX13 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ube3dQ8BX13 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ube3dQ8BX13 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ube3dQ8BX13 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Ube3dQ8BX13 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ube3dQ8BX13 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ube3dQ8BX13 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ube3dQ8BX13 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ube3dQ8BX13 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms