Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
Suds3Q8BR65 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Suds3Q8BR65 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Suds3Q8BR65 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
Suds3Q8BR65 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC22.43■■□□□ 1.18
Suds3Q8BR65 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Suds3Q8BR65 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Suds3Q8BR65 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Suds3Q8BR65 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Suds3Q8BR65 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Suds3Q8BR65 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Suds3Q8BR65 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC22.42■■□□□ 1.18
Suds3Q8BR65 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Suds3Q8BR65 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Suds3Q8BR65 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Suds3Q8BR65 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Suds3Q8BR65 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Suds3Q8BR65 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC22.41■■□□□ 1.18
Suds3Q8BR65 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC22.41■■□□□ 1.18
Suds3Q8BR65 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.41■■□□□ 1.18
Suds3Q8BR65 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Suds3Q8BR65 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Suds3Q8BR65 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Suds3Q8BR65 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Suds3Q8BR65 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Suds3Q8BR65 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
Suds3Q8BR65 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC22.4■■□□□ 1.18
Suds3Q8BR65 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Suds3Q8BR65 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Suds3Q8BR65 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC22.4■■□□□ 1.18
Suds3Q8BR65 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Suds3Q8BR65 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Suds3Q8BR65 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC22.4■■□□□ 1.18
Suds3Q8BR65 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC22.4■■□□□ 1.18
Suds3Q8BR65 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Suds3Q8BR65 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Suds3Q8BR65 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Suds3Q8BR65 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Suds3Q8BR65 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.39■■□□□ 1.17
Suds3Q8BR65 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
Suds3Q8BR65 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Suds3Q8BR65 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Suds3Q8BR65 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC22.39■■□□□ 1.17
Suds3Q8BR65 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Suds3Q8BR65 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Suds3Q8BR65 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Suds3Q8BR65 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Suds3Q8BR65 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Suds3Q8BR65 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Suds3Q8BR65 Terc-201ENSMUST00000082862 423 ntBASIC22.38■■□□□ 1.17
Suds3Q8BR65 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Suds3Q8BR65 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Suds3Q8BR65 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Suds3Q8BR65 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Suds3Q8BR65 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Suds3Q8BR65 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Suds3Q8BR65 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC22.37■■□□□ 1.17
Suds3Q8BR65 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Suds3Q8BR65 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Suds3Q8BR65 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Suds3Q8BR65 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Suds3Q8BR65 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC22.36■■□□□ 1.17
Suds3Q8BR65 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Suds3Q8BR65 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC22.36■■□□□ 1.17
Suds3Q8BR65 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Suds3Q8BR65 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.36■■□□□ 1.17
Suds3Q8BR65 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Suds3Q8BR65 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Suds3Q8BR65 AC164433.2-201ENSMUST00000226346 1701 ntBASIC22.35■■□□□ 1.17
Suds3Q8BR65 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Suds3Q8BR65 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Suds3Q8BR65 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Suds3Q8BR65 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Suds3Q8BR65 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Suds3Q8BR65 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
Suds3Q8BR65 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Suds3Q8BR65 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Suds3Q8BR65 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
Suds3Q8BR65 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Suds3Q8BR65 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Suds3Q8BR65 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Suds3Q8BR65 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Suds3Q8BR65 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Suds3Q8BR65 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC22.32■■□□□ 1.16
Suds3Q8BR65 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Suds3Q8BR65 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Suds3Q8BR65 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Suds3Q8BR65 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Suds3Q8BR65 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Suds3Q8BR65 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.31■■□□□ 1.16
Suds3Q8BR65 Gm12366-201ENSMUST00000121722 873 ntBASIC22.31■■□□□ 1.16
Suds3Q8BR65 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.31■■□□□ 1.16
Suds3Q8BR65 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.31■■□□□ 1.16
Suds3Q8BR65 Gm5786-201ENSMUST00000085368 882 ntBASIC22.31■■□□□ 1.16
Suds3Q8BR65 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Suds3Q8BR65 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC22.31■■□□□ 1.16
Suds3Q8BR65 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Suds3Q8BR65 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC22.3■■□□□ 1.16
Suds3Q8BR65 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Suds3Q8BR65 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms