Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Chmp2bQ8BJF9 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Chmp2bQ8BJF9 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Chmp2bQ8BJF9 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.53■■□□□ 1.2
Chmp2bQ8BJF9 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
Chmp2bQ8BJF9 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Chmp2bQ8BJF9 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC22.53■■□□□ 1.2
Chmp2bQ8BJF9 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Chmp2bQ8BJF9 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Chmp2bQ8BJF9 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Chmp2bQ8BJF9 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Chmp2bQ8BJF9 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Chmp2bQ8BJF9 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Chmp2bQ8BJF9 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Chmp2bQ8BJF9 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.52■■□□□ 1.2
Chmp2bQ8BJF9 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Chmp2bQ8BJF9 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Chmp2bQ8BJF9 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Chmp2bQ8BJF9 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Chmp2bQ8BJF9 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
Chmp2bQ8BJF9 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Chmp2bQ8BJF9 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Chmp2bQ8BJF9 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
Chmp2bQ8BJF9 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Chmp2bQ8BJF9 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Chmp2bQ8BJF9 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Chmp2bQ8BJF9 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Chmp2bQ8BJF9 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Chmp2bQ8BJF9 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Chmp2bQ8BJF9 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Chmp2bQ8BJF9 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Chmp2bQ8BJF9 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Chmp2bQ8BJF9 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Chmp2bQ8BJF9 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Chmp2bQ8BJF9 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.46■■□□□ 1.19
Chmp2bQ8BJF9 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Chmp2bQ8BJF9 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.46■■□□□ 1.19
Chmp2bQ8BJF9 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC22.45■■□□□ 1.19
Chmp2bQ8BJF9 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.45■■□□□ 1.18
Chmp2bQ8BJF9 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Chmp2bQ8BJF9 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Chmp2bQ8BJF9 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Chmp2bQ8BJF9 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Chmp2bQ8BJF9 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Chmp2bQ8BJF9 Gm9812-201ENSMUST00000061934 968 ntBASIC22.44■■□□□ 1.18
Chmp2bQ8BJF9 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Chmp2bQ8BJF9 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Chmp2bQ8BJF9 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.43■■□□□ 1.18
Chmp2bQ8BJF9 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Chmp2bQ8BJF9 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Chmp2bQ8BJF9 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Chmp2bQ8BJF9 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.42■■□□□ 1.18
Chmp2bQ8BJF9 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Chmp2bQ8BJF9 Mir3960-201ENSMUST00000198213 73 ntBASIC22.42■■□□□ 1.18
Chmp2bQ8BJF9 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Chmp2bQ8BJF9 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
Chmp2bQ8BJF9 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Chmp2bQ8BJF9 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Chmp2bQ8BJF9 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Chmp2bQ8BJF9 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Chmp2bQ8BJF9 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Chmp2bQ8BJF9 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Chmp2bQ8BJF9 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Chmp2bQ8BJF9 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Chmp2bQ8BJF9 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC22.4■■□□□ 1.18
Chmp2bQ8BJF9 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC22.4■■□□□ 1.18
Chmp2bQ8BJF9 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC22.4■■□□□ 1.18
Chmp2bQ8BJF9 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Chmp2bQ8BJF9 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Chmp2bQ8BJF9 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Chmp2bQ8BJF9 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Chmp2bQ8BJF9 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Chmp2bQ8BJF9 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Chmp2bQ8BJF9 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.18
Chmp2bQ8BJF9 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC22.39■■□□□ 1.17
Chmp2bQ8BJF9 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.39■■□□□ 1.17
Chmp2bQ8BJF9 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Chmp2bQ8BJF9 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC22.39■■□□□ 1.17
Chmp2bQ8BJF9 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
Chmp2bQ8BJF9 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Chmp2bQ8BJF9 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Chmp2bQ8BJF9 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Chmp2bQ8BJF9 Gm45364-201ENSMUST00000210883 159 ntBASIC22.38■■□□□ 1.17
Chmp2bQ8BJF9 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
Chmp2bQ8BJF9 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Chmp2bQ8BJF9 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC22.38■■□□□ 1.17
Chmp2bQ8BJF9 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC22.38■■□□□ 1.17
Chmp2bQ8BJF9 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Chmp2bQ8BJF9 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
Chmp2bQ8BJF9 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.37■■□□□ 1.17
Chmp2bQ8BJF9 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Chmp2bQ8BJF9 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Chmp2bQ8BJF9 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC22.37■■□□□ 1.17
Chmp2bQ8BJF9 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Chmp2bQ8BJF9 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Chmp2bQ8BJF9 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC22.37■■□□□ 1.17
Chmp2bQ8BJF9 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Chmp2bQ8BJF9 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Chmp2bQ8BJF9 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Chmp2bQ8BJF9 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.36■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms