Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Trim23Q8BGX0 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim23Q8BGX0 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Trim23Q8BGX0 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim23Q8BGX0 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim23Q8BGX0 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim23Q8BGX0 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim23Q8BGX0 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Trim23Q8BGX0 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim23Q8BGX0 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim23Q8BGX0 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim23Q8BGX0 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Trim23Q8BGX0 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim23Q8BGX0 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Trim23Q8BGX0 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim23Q8BGX0 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.35■■□□□ 1.01
Trim23Q8BGX0 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim23Q8BGX0 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim23Q8BGX0 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.35■■□□□ 1.01
Trim23Q8BGX0 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim23Q8BGX0 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Trim23Q8BGX0 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.35■■□□□ 1.01
Trim23Q8BGX0 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Trim23Q8BGX0 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim23Q8BGX0 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim23Q8BGX0 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim23Q8BGX0 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim23Q8BGX0 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Trim23Q8BGX0 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim23Q8BGX0 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Trim23Q8BGX0 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Trim23Q8BGX0 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Trim23Q8BGX0 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim23Q8BGX0 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Trim23Q8BGX0 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim23Q8BGX0 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Trim23Q8BGX0 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Trim23Q8BGX0 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim23Q8BGX0 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.32■■□□□ 1
Trim23Q8BGX0 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.32■■□□□ 1
Trim23Q8BGX0 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim23Q8BGX0 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim23Q8BGX0 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim23Q8BGX0 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim23Q8BGX0 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim23Q8BGX0 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim23Q8BGX0 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.3■■□□□ 1
Trim23Q8BGX0 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Trim23Q8BGX0 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim23Q8BGX0 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.29■■□□□ 1
Trim23Q8BGX0 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.29■■□□□ 1
Trim23Q8BGX0 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim23Q8BGX0 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.29■■□□□ 1
Trim23Q8BGX0 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.29■■□□□ 1
Trim23Q8BGX0 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim23Q8BGX0 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim23Q8BGX0 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim23Q8BGX0 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.28■■□□□ 1
Trim23Q8BGX0 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Trim23Q8BGX0 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.28■■□□□ 1
Trim23Q8BGX0 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
Trim23Q8BGX0 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim23Q8BGX0 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Trim23Q8BGX0 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Trim23Q8BGX0 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim23Q8BGX0 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim23Q8BGX0 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.27■■□□□ 1
Trim23Q8BGX0 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.27■□□□□ 0.99
Trim23Q8BGX0 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Trim23Q8BGX0 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.26■□□□□ 0.99
Trim23Q8BGX0 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim23Q8BGX0 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.26■□□□□ 0.99
Trim23Q8BGX0 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim23Q8BGX0 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim23Q8BGX0 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim23Q8BGX0 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Trim23Q8BGX0 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.25■□□□□ 0.99
Trim23Q8BGX0 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim23Q8BGX0 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.25■□□□□ 0.99
Trim23Q8BGX0 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.25■□□□□ 0.99
Trim23Q8BGX0 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim23Q8BGX0 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Trim23Q8BGX0 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim23Q8BGX0 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim23Q8BGX0 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.24■□□□□ 0.99
Trim23Q8BGX0 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trim23Q8BGX0 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim23Q8BGX0 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim23Q8BGX0 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Trim23Q8BGX0 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Trim23Q8BGX0 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim23Q8BGX0 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.23■□□□□ 0.99
Trim23Q8BGX0 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Trim23Q8BGX0 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Trim23Q8BGX0 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim23Q8BGX0 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim23Q8BGX0 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim23Q8BGX0 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim23Q8BGX0 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim23Q8BGX0 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms