Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Upk3bQ80YF6 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Upk3bQ80YF6 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Upk3bQ80YF6 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Upk3bQ80YF6 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.66■□□□□ 0.58
Upk3bQ80YF6 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.66■□□□□ 0.58
Upk3bQ80YF6 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Upk3bQ80YF6 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Upk3bQ80YF6 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Upk3bQ80YF6 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Upk3bQ80YF6 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Upk3bQ80YF6 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
Upk3bQ80YF6 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.65■□□□□ 0.58
Upk3bQ80YF6 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.65■□□□□ 0.58
Upk3bQ80YF6 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Upk3bQ80YF6 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Upk3bQ80YF6 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Upk3bQ80YF6 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.63■□□□□ 0.57
Upk3bQ80YF6 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.63■□□□□ 0.57
Upk3bQ80YF6 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Upk3bQ80YF6 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.63■□□□□ 0.57
Upk3bQ80YF6 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Upk3bQ80YF6 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Upk3bQ80YF6 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Upk3bQ80YF6 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.63■□□□□ 0.57
Upk3bQ80YF6 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Upk3bQ80YF6 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Upk3bQ80YF6 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Upk3bQ80YF6 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Upk3bQ80YF6 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Upk3bQ80YF6 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Upk3bQ80YF6 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Upk3bQ80YF6 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Upk3bQ80YF6 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Upk3bQ80YF6 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.6■□□□□ 0.57
Upk3bQ80YF6 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Upk3bQ80YF6 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Upk3bQ80YF6 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Upk3bQ80YF6 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Upk3bQ80YF6 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.6■□□□□ 0.57
Upk3bQ80YF6 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Upk3bQ80YF6 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.6■□□□□ 0.57
Upk3bQ80YF6 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Upk3bQ80YF6 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Upk3bQ80YF6 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Upk3bQ80YF6 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Upk3bQ80YF6 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Upk3bQ80YF6 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Upk3bQ80YF6 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Upk3bQ80YF6 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Upk3bQ80YF6 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Upk3bQ80YF6 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Upk3bQ80YF6 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Upk3bQ80YF6 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Upk3bQ80YF6 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.58■□□□□ 0.56
Upk3bQ80YF6 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Upk3bQ80YF6 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Upk3bQ80YF6 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.57■□□□□ 0.56
Upk3bQ80YF6 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Upk3bQ80YF6 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Upk3bQ80YF6 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.57■□□□□ 0.56
Upk3bQ80YF6 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.57■□□□□ 0.56
Upk3bQ80YF6 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.57■□□□□ 0.56
Upk3bQ80YF6 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Upk3bQ80YF6 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Upk3bQ80YF6 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.57■□□□□ 0.56
Upk3bQ80YF6 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Upk3bQ80YF6 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Upk3bQ80YF6 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Upk3bQ80YF6 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Upk3bQ80YF6 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Upk3bQ80YF6 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18.56■□□□□ 0.56
Upk3bQ80YF6 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.55■□□□□ 0.56
Upk3bQ80YF6 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Upk3bQ80YF6 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Upk3bQ80YF6 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Upk3bQ80YF6 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Upk3bQ80YF6 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Upk3bQ80YF6 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Upk3bQ80YF6 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Upk3bQ80YF6 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.54■□□□□ 0.56
Upk3bQ80YF6 Gm9939-201ENSMUST00000067161 1154 ntBASIC18.54■□□□□ 0.56
Upk3bQ80YF6 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Upk3bQ80YF6 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.53■□□□□ 0.56
Upk3bQ80YF6 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Upk3bQ80YF6 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Upk3bQ80YF6 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Upk3bQ80YF6 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.52■□□□□ 0.56
Upk3bQ80YF6 Gm6821-201ENSMUST00000107540 542 ntBASIC18.52■□□□□ 0.56
Upk3bQ80YF6 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Upk3bQ80YF6 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Upk3bQ80YF6 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Upk3bQ80YF6 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Upk3bQ80YF6 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.51■□□□□ 0.55
Upk3bQ80YF6 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Upk3bQ80YF6 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Upk3bQ80YF6 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Upk3bQ80YF6 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Upk3bQ80YF6 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.51■□□□□ 0.55
Upk3bQ80YF6 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms