Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdh19Q80TF3 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.72■■□□□ 1.07
Pcdh19Q80TF3 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.72■■□□□ 1.07
Pcdh19Q80TF3 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdh19Q80TF3 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Pcdh19Q80TF3 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdh19Q80TF3 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.72■■□□□ 1.07
Pcdh19Q80TF3 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdh19Q80TF3 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdh19Q80TF3 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdh19Q80TF3 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdh19Q80TF3 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Pcdh19Q80TF3 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.7■■□□□ 1.07
Pcdh19Q80TF3 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Pcdh19Q80TF3 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdh19Q80TF3 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdh19Q80TF3 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.7■■□□□ 1.06
Pcdh19Q80TF3 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.69■■□□□ 1.06
Pcdh19Q80TF3 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Pcdh19Q80TF3 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdh19Q80TF3 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Pcdh19Q80TF3 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.68■■□□□ 1.06
Pcdh19Q80TF3 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Pcdh19Q80TF3 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdh19Q80TF3 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Pcdh19Q80TF3 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Pcdh19Q80TF3 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdh19Q80TF3 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdh19Q80TF3 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Pcdh19Q80TF3 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdh19Q80TF3 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
Pcdh19Q80TF3 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.66■■□□□ 1.06
Pcdh19Q80TF3 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.66■■□□□ 1.06
Pcdh19Q80TF3 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.66■■□□□ 1.06
Pcdh19Q80TF3 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdh19Q80TF3 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdh19Q80TF3 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdh19Q80TF3 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdh19Q80TF3 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.65■■□□□ 1.06
Pcdh19Q80TF3 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.65■■□□□ 1.06
Pcdh19Q80TF3 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.65■■□□□ 1.06
Pcdh19Q80TF3 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Pcdh19Q80TF3 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdh19Q80TF3 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdh19Q80TF3 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Pcdh19Q80TF3 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdh19Q80TF3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdh19Q80TF3 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdh19Q80TF3 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdh19Q80TF3 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pcdh19Q80TF3 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdh19Q80TF3 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.64■■□□□ 1.05
Pcdh19Q80TF3 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Pcdh19Q80TF3 Gm5812-201ENSMUST00000061073 957 ntBASIC21.64■■□□□ 1.05
Pcdh19Q80TF3 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdh19Q80TF3 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdh19Q80TF3 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdh19Q80TF3 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdh19Q80TF3 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdh19Q80TF3 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Pcdh19Q80TF3 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.63■■□□□ 1.05
Pcdh19Q80TF3 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdh19Q80TF3 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdh19Q80TF3 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdh19Q80TF3 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdh19Q80TF3 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdh19Q80TF3 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdh19Q80TF3 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdh19Q80TF3 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdh19Q80TF3 Gm45444-201ENSMUST00000211394 898 ntBASIC21.61■■□□□ 1.05
Pcdh19Q80TF3 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdh19Q80TF3 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdh19Q80TF3 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdh19Q80TF3 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdh19Q80TF3 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdh19Q80TF3 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.59■■□□□ 1.05
Pcdh19Q80TF3 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdh19Q80TF3 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdh19Q80TF3 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdh19Q80TF3 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdh19Q80TF3 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdh19Q80TF3 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdh19Q80TF3 Gm43566-201ENSMUST00000196851 808 ntBASIC21.58■■□□□ 1.05
Pcdh19Q80TF3 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
Pcdh19Q80TF3 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.58■■□□□ 1.05
Pcdh19Q80TF3 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdh19Q80TF3 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.58■■□□□ 1.04
Pcdh19Q80TF3 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdh19Q80TF3 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.57■■□□□ 1.04
Pcdh19Q80TF3 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Pcdh19Q80TF3 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
Pcdh19Q80TF3 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdh19Q80TF3 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.57■■□□□ 1.04
Pcdh19Q80TF3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdh19Q80TF3 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdh19Q80TF3 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdh19Q80TF3 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdh19Q80TF3 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdh19Q80TF3 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdh19Q80TF3 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms