Protein–RNA interactions for Protein: Q62249

Sox19, Protein SOX-19 (Fragment), mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox19Q62249 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sox19Q62249 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sox19Q62249 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sox19Q62249 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sox19Q62249 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.85■□□□□ 0.61
Sox19Q62249 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
Sox19Q62249 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox19Q62249 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox19Q62249 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
Sox19Q62249 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox19Q62249 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sox19Q62249 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Sox19Q62249 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox19Q62249 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sox19Q62249 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sox19Q62249 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sox19Q62249 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox19Q62249 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.82■□□□□ 0.6
Sox19Q62249 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sox19Q62249 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox19Q62249 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sox19Q62249 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox19Q62249 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox19Q62249 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Sox19Q62249 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox19Q62249 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Sox19Q62249 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sox19Q62249 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox19Q62249 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox19Q62249 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox19Q62249 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox19Q62249 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC18.81■□□□□ 0.6
Sox19Q62249 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Sox19Q62249 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox19Q62249 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sox19Q62249 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Sox19Q62249 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Sox19Q62249 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox19Q62249 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox19Q62249 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox19Q62249 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sox19Q62249 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Sox19Q62249 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sox19Q62249 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sox19Q62249 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox19Q62249 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Sox19Q62249 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox19Q62249 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.78■□□□□ 0.6
Sox19Q62249 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox19Q62249 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox19Q62249 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sox19Q62249 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sox19Q62249 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Sox19Q62249 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Sox19Q62249 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sox19Q62249 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sox19Q62249 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC18.77■□□□□ 0.6
Sox19Q62249 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sox19Q62249 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sox19Q62249 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox19Q62249 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox19Q62249 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox19Q62249 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.76■□□□□ 0.59
Sox19Q62249 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox19Q62249 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sox19Q62249 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Sox19Q62249 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sox19Q62249 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sox19Q62249 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Sox19Q62249 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.75■□□□□ 0.59
Sox19Q62249 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sox19Q62249 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sox19Q62249 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sox19Q62249 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.74■□□□□ 0.59
Sox19Q62249 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sox19Q62249 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sox19Q62249 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Sox19Q62249 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sox19Q62249 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sox19Q62249 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Sox19Q62249 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Sox19Q62249 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sox19Q62249 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Sox19Q62249 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sox19Q62249 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sox19Q62249 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.71■□□□□ 0.59
Sox19Q62249 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sox19Q62249 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox19Q62249 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sox19Q62249 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox19Q62249 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Sox19Q62249 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.69■□□□□ 0.58
Sox19Q62249 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox19Q62249 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.69■□□□□ 0.58
Sox19Q62249 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox19Q62249 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox19Q62249 Nkain2-201ENSMUST00000092602 558 ntBASIC18.69■□□□□ 0.58
Sox19Q62249 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Sox19Q62249 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox19Q62249 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms