Protein–RNA interactions for Protein: Q5SSE9

Abca13, ATP-binding cassette sub-family A member 13, mousemouse

Predictions only

Length 5,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca13Q5SSE9 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Abca13Q5SSE9 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Abca13Q5SSE9 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Abca13Q5SSE9 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Abca13Q5SSE9 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC13.64□□□□□ -0.23
Abca13Q5SSE9 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC13.64□□□□□ -0.23
Abca13Q5SSE9 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC13.64□□□□□ -0.23
Abca13Q5SSE9 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Abca13Q5SSE9 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Abca13Q5SSE9 Gm27801-201ENSMUST00000184174 223 ntBASIC13.64□□□□□ -0.23
Abca13Q5SSE9 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Abca13Q5SSE9 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Abca13Q5SSE9 CT025689.6-201ENSMUST00000224991 1104 ntBASIC13.64□□□□□ -0.23
Abca13Q5SSE9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Abca13Q5SSE9 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Abca13Q5SSE9 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Abca13Q5SSE9 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Abca13Q5SSE9 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Abca13Q5SSE9 Gm43445-201ENSMUST00000198564 2091 ntBASIC13.63□□□□□ -0.23
Abca13Q5SSE9 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Abca13Q5SSE9 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Abca13Q5SSE9 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC13.62□□□□□ -0.23
Abca13Q5SSE9 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Abca13Q5SSE9 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC13.62□□□□□ -0.23
Abca13Q5SSE9 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Abca13Q5SSE9 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Abca13Q5SSE9 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Abca13Q5SSE9 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Abca13Q5SSE9 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Abca13Q5SSE9 Gm28731-201ENSMUST00000185564 1569 ntBASIC13.61□□□□□ -0.23
Abca13Q5SSE9 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC13.61□□□□□ -0.23
Abca13Q5SSE9 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Abca13Q5SSE9 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abca13Q5SSE9 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Abca13Q5SSE9 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abca13Q5SSE9 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Abca13Q5SSE9 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC13.61□□□□□ -0.23
Abca13Q5SSE9 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC13.6□□□□□ -0.23
Abca13Q5SSE9 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abca13Q5SSE9 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Abca13Q5SSE9 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abca13Q5SSE9 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Abca13Q5SSE9 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC13.6□□□□□ -0.23
Abca13Q5SSE9 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Abca13Q5SSE9 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC13.6□□□□□ -0.23
Abca13Q5SSE9 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Abca13Q5SSE9 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Abca13Q5SSE9 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Abca13Q5SSE9 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Abca13Q5SSE9 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC13.59□□□□□ -0.23
Abca13Q5SSE9 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Abca13Q5SSE9 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Abca13Q5SSE9 Gm22238-201ENSMUST00000175222 88 ntBASIC13.59□□□□□ -0.23
Abca13Q5SSE9 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC13.59□□□□□ -0.23
Abca13Q5SSE9 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC13.58□□□□□ -0.23
Abca13Q5SSE9 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Abca13Q5SSE9 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Abca13Q5SSE9 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Abca13Q5SSE9 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Abca13Q5SSE9 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Abca13Q5SSE9 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Abca13Q5SSE9 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Abca13Q5SSE9 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Abca13Q5SSE9 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Abca13Q5SSE9 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Abca13Q5SSE9 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Abca13Q5SSE9 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC13.56□□□□□ -0.24
Abca13Q5SSE9 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Abca13Q5SSE9 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC13.56□□□□□ -0.24
Abca13Q5SSE9 Gm7291-201ENSMUST00000199147 382 ntBASIC13.56□□□□□ -0.24
Abca13Q5SSE9 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Abca13Q5SSE9 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Abca13Q5SSE9 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Abca13Q5SSE9 Gm26571-201ENSMUST00000181399 666 ntBASIC13.55□□□□□ -0.24
Abca13Q5SSE9 Gm12669-201ENSMUST00000122162 1009 ntBASIC13.55□□□□□ -0.24
Abca13Q5SSE9 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Abca13Q5SSE9 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Abca13Q5SSE9 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC13.55□□□□□ -0.24
Abca13Q5SSE9 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Abca13Q5SSE9 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC13.55□□□□□ -0.24
Abca13Q5SSE9 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC13.54□□□□□ -0.24
Abca13Q5SSE9 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Abca13Q5SSE9 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC13.54□□□□□ -0.24
Abca13Q5SSE9 Spcs1-204ENSMUST00000226782 949 ntBASIC13.54□□□□□ -0.24
Abca13Q5SSE9 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Abca13Q5SSE9 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Abca13Q5SSE9 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC13.54□□□□□ -0.24
Abca13Q5SSE9 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Abca13Q5SSE9 Gm14121-201ENSMUST00000121441 1380 ntBASIC13.54□□□□□ -0.24
Abca13Q5SSE9 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Abca13Q5SSE9 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Abca13Q5SSE9 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Abca13Q5SSE9 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Abca13Q5SSE9 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Abca13Q5SSE9 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC13.53□□□□□ -0.24
Abca13Q5SSE9 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC13.53□□□□□ -0.24
Abca13Q5SSE9 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC13.53□□□□□ -0.24
Abca13Q5SSE9 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Abca13Q5SSE9 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC13.53□□□□□ -0.24
Abca13Q5SSE9 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms