Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trav2Q5R1I9 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Trav2Q5R1I9 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Trav2Q5R1I9 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav2Q5R1I9 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav2Q5R1I9 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.6■□□□□ 0.41
Trav2Q5R1I9 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav2Q5R1I9 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav2Q5R1I9 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav2Q5R1I9 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav2Q5R1I9 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Trav2Q5R1I9 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Trav2Q5R1I9 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Trav2Q5R1I9 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav2Q5R1I9 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav2Q5R1I9 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav2Q5R1I9 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav2Q5R1I9 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav2Q5R1I9 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav2Q5R1I9 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav2Q5R1I9 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC17.58■□□□□ 0.4
Trav2Q5R1I9 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trav2Q5R1I9 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav2Q5R1I9 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav2Q5R1I9 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav2Q5R1I9 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC17.57■□□□□ 0.4
Trav2Q5R1I9 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav2Q5R1I9 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav2Q5R1I9 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Trav2Q5R1I9 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trav2Q5R1I9 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav2Q5R1I9 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav2Q5R1I9 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav2Q5R1I9 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav2Q5R1I9 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.56■□□□□ 0.4
Trav2Q5R1I9 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav2Q5R1I9 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav2Q5R1I9 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trav2Q5R1I9 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trav2Q5R1I9 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Trav2Q5R1I9 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Trav2Q5R1I9 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav2Q5R1I9 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Trav2Q5R1I9 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Trav2Q5R1I9 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav2Q5R1I9 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Trav2Q5R1I9 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Trav2Q5R1I9 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.55■□□□□ 0.4
Trav2Q5R1I9 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav2Q5R1I9 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.54■□□□□ 0.4
Trav2Q5R1I9 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.54■□□□□ 0.4
Trav2Q5R1I9 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.54■□□□□ 0.4
Trav2Q5R1I9 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav2Q5R1I9 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Trav2Q5R1I9 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav2Q5R1I9 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav2Q5R1I9 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav2Q5R1I9 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav2Q5R1I9 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav2Q5R1I9 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Trav2Q5R1I9 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Trav2Q5R1I9 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav2Q5R1I9 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav2Q5R1I9 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.52■□□□□ 0.4
Trav2Q5R1I9 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav2Q5R1I9 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Trav2Q5R1I9 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav2Q5R1I9 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav2Q5R1I9 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Trav2Q5R1I9 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav2Q5R1I9 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.5■□□□□ 0.39
Trav2Q5R1I9 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav2Q5R1I9 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav2Q5R1I9 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav2Q5R1I9 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav2Q5R1I9 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.49■□□□□ 0.39
Trav2Q5R1I9 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav2Q5R1I9 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav2Q5R1I9 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav2Q5R1I9 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.48■□□□□ 0.39
Trav2Q5R1I9 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav2Q5R1I9 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav2Q5R1I9 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trav2Q5R1I9 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav2Q5R1I9 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
Trav2Q5R1I9 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.48■□□□□ 0.39
Trav2Q5R1I9 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.48■□□□□ 0.39
Trav2Q5R1I9 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.48■□□□□ 0.39
Trav2Q5R1I9 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Trav2Q5R1I9 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav2Q5R1I9 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav2Q5R1I9 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trav2Q5R1I9 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav2Q5R1I9 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav2Q5R1I9 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.47■□□□□ 0.39
Trav2Q5R1I9 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trav2Q5R1I9 Gm45444-201ENSMUST00000211394 898 ntBASIC17.47■□□□□ 0.39
Trav2Q5R1I9 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav2Q5R1I9 Gm5812-201ENSMUST00000061073 957 ntBASIC17.47■□□□□ 0.39
Trav2Q5R1I9 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms