Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Herc2Q4U2R1 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Herc2Q4U2R1 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Herc2Q4U2R1 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Herc2Q4U2R1 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Herc2Q4U2R1 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Herc2Q4U2R1 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Herc2Q4U2R1 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Herc2Q4U2R1 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Herc2Q4U2R1 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Herc2Q4U2R1 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC13.89□□□□□ -0.19
Herc2Q4U2R1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Herc2Q4U2R1 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC13.89□□□□□ -0.19
Herc2Q4U2R1 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Herc2Q4U2R1 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Herc2Q4U2R1 Gm10849-201ENSMUST00000100397 618 ntBASIC13.89□□□□□ -0.19
Herc2Q4U2R1 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC13.89□□□□□ -0.19
Herc2Q4U2R1 Gm5874-201ENSMUST00000096101 508 ntBASIC13.89□□□□□ -0.19
Herc2Q4U2R1 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Herc2Q4U2R1 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Herc2Q4U2R1 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Herc2Q4U2R1 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Herc2Q4U2R1 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Herc2Q4U2R1 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Herc2Q4U2R1 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Herc2Q4U2R1 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Herc2Q4U2R1 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Herc2Q4U2R1 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC13.87□□□□□ -0.19
Herc2Q4U2R1 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Herc2Q4U2R1 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Herc2Q4U2R1 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Herc2Q4U2R1 Gm16464-201ENSMUST00000117815 1095 ntBASIC13.87□□□□□ -0.19
Herc2Q4U2R1 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC13.87□□□□□ -0.19
Herc2Q4U2R1 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Herc2Q4U2R1 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Herc2Q4U2R1 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC13.86□□□□□ -0.19
Herc2Q4U2R1 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Herc2Q4U2R1 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Herc2Q4U2R1 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Herc2Q4U2R1 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Herc2Q4U2R1 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Herc2Q4U2R1 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Herc2Q4U2R1 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Herc2Q4U2R1 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Herc2Q4U2R1 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Herc2Q4U2R1 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC13.85□□□□□ -0.19
Herc2Q4U2R1 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Herc2Q4U2R1 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Herc2Q4U2R1 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Herc2Q4U2R1 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Herc2Q4U2R1 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Herc2Q4U2R1 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Herc2Q4U2R1 Gm6658-202ENSMUST00000209493 1885 ntBASIC13.84□□□□□ -0.19
Herc2Q4U2R1 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Herc2Q4U2R1 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Herc2Q4U2R1 Gm21168-201ENSMUST00000199646 1096 ntBASIC13.83□□□□□ -0.19
Herc2Q4U2R1 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Herc2Q4U2R1 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC13.83□□□□□ -0.2
Herc2Q4U2R1 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Herc2Q4U2R1 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC13.83□□□□□ -0.2
Herc2Q4U2R1 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Herc2Q4U2R1 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Herc2Q4U2R1 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Herc2Q4U2R1 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Herc2Q4U2R1 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Herc2Q4U2R1 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Herc2Q4U2R1 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Herc2Q4U2R1 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Herc2Q4U2R1 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Herc2Q4U2R1 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Herc2Q4U2R1 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Herc2Q4U2R1 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Herc2Q4U2R1 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Herc2Q4U2R1 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Herc2Q4U2R1 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC13.81□□□□□ -0.2
Herc2Q4U2R1 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Herc2Q4U2R1 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Herc2Q4U2R1 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Herc2Q4U2R1 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Herc2Q4U2R1 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC13.8□□□□□ -0.2
Herc2Q4U2R1 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Herc2Q4U2R1 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Herc2Q4U2R1 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC13.8□□□□□ -0.2
Herc2Q4U2R1 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Herc2Q4U2R1 Gm7291-201ENSMUST00000199147 382 ntBASIC13.8□□□□□ -0.2
Herc2Q4U2R1 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Herc2Q4U2R1 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC13.8□□□□□ -0.2
Herc2Q4U2R1 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC13.79□□□□□ -0.2
Herc2Q4U2R1 Gm26571-201ENSMUST00000181399 666 ntBASIC13.79□□□□□ -0.2
Herc2Q4U2R1 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC13.79□□□□□ -0.2
Herc2Q4U2R1 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC13.79□□□□□ -0.2
Herc2Q4U2R1 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Herc2Q4U2R1 CT025689.6-201ENSMUST00000224991 1104 ntBASIC13.79□□□□□ -0.2
Herc2Q4U2R1 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Herc2Q4U2R1 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC13.79□□□□□ -0.2
Herc2Q4U2R1 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Herc2Q4U2R1 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC13.79□□□□□ -0.2
Herc2Q4U2R1 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Herc2Q4U2R1 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Herc2Q4U2R1 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms