Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC16.01■□□□□ 0.15
Cks1brtQ3UNC9 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cks1brtQ3UNC9 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cks1brtQ3UNC9 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cks1brtQ3UNC9 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cks1brtQ3UNC9 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cks1brtQ3UNC9 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cks1brtQ3UNC9 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Cks1brtQ3UNC9 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cks1brtQ3UNC9 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cks1brtQ3UNC9 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC16.01■□□□□ 0.15
Cks1brtQ3UNC9 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cks1brtQ3UNC9 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cks1brtQ3UNC9 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC16.01■□□□□ 0.15
Cks1brtQ3UNC9 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cks1brtQ3UNC9 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cks1brtQ3UNC9 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Cks1brtQ3UNC9 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Cks1brtQ3UNC9 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Cks1brtQ3UNC9 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Cks1brtQ3UNC9 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cks1brtQ3UNC9 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16■□□□□ 0.15
Cks1brtQ3UNC9 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Cks1brtQ3UNC9 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cks1brtQ3UNC9 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Cks1brtQ3UNC9 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cks1brtQ3UNC9 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Cks1brtQ3UNC9 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Cks1brtQ3UNC9 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.99■□□□□ 0.15
Cks1brtQ3UNC9 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cks1brtQ3UNC9 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cks1brtQ3UNC9 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Cks1brtQ3UNC9 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cks1brtQ3UNC9 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.99■□□□□ 0.15
Cks1brtQ3UNC9 Gm27322-201ENSMUST00000184007 104 ntBASIC15.99■□□□□ 0.15
Cks1brtQ3UNC9 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cks1brtQ3UNC9 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Cks1brtQ3UNC9 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cks1brtQ3UNC9 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cks1brtQ3UNC9 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cks1brtQ3UNC9 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cks1brtQ3UNC9 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC15.98■□□□□ 0.15
Cks1brtQ3UNC9 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC15.98■□□□□ 0.15
Cks1brtQ3UNC9 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cks1brtQ3UNC9 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cks1brtQ3UNC9 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Cks1brtQ3UNC9 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cks1brtQ3UNC9 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cks1brtQ3UNC9 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cks1brtQ3UNC9 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cks1brtQ3UNC9 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Cks1brtQ3UNC9 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cks1brtQ3UNC9 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Cks1brtQ3UNC9 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cks1brtQ3UNC9 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cks1brtQ3UNC9 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cks1brtQ3UNC9 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cks1brtQ3UNC9 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cks1brtQ3UNC9 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cks1brtQ3UNC9 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cks1brtQ3UNC9 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Cks1brtQ3UNC9 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cks1brtQ3UNC9 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cks1brtQ3UNC9 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cks1brtQ3UNC9 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Cks1brtQ3UNC9 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cks1brtQ3UNC9 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC15.95■□□□□ 0.14
Cks1brtQ3UNC9 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cks1brtQ3UNC9 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cks1brtQ3UNC9 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cks1brtQ3UNC9 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cks1brtQ3UNC9 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cks1brtQ3UNC9 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cks1brtQ3UNC9 Gm6934-201ENSMUST00000194780 1905 ntBASIC15.94■□□□□ 0.14
Cks1brtQ3UNC9 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cks1brtQ3UNC9 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Cks1brtQ3UNC9 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC15.94■□□□□ 0.14
Cks1brtQ3UNC9 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cks1brtQ3UNC9 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Cks1brtQ3UNC9 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cks1brtQ3UNC9 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Cks1brtQ3UNC9 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cks1brtQ3UNC9 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Cks1brtQ3UNC9 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.93■□□□□ 0.14
Cks1brtQ3UNC9 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cks1brtQ3UNC9 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cks1brtQ3UNC9 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cks1brtQ3UNC9 Peli2-204ENSMUST00000226513 1320 ntBASIC15.93■□□□□ 0.14
Cks1brtQ3UNC9 Gm26766-202ENSMUST00000227544 2347 ntBASIC15.93■□□□□ 0.14
Cks1brtQ3UNC9 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cks1brtQ3UNC9 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cks1brtQ3UNC9 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cks1brtQ3UNC9 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cks1brtQ3UNC9 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cks1brtQ3UNC9 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Cks1brtQ3UNC9 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cks1brtQ3UNC9 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cks1brtQ3UNC9 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cks1brtQ3UNC9 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cks1brtQ3UNC9 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 476.8 ms