Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Q3U1D9 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Q3U1D9 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Q3U1D9 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.24■□□□□ 0.67
Q3U1D9 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Q3U1D9 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Q3U1D9 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Q3U1D9 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Q3U1D9 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Q3U1D9 Gm43566-201ENSMUST00000196851 808 ntBASIC19.23■□□□□ 0.67
Q3U1D9 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Q3U1D9 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Q3U1D9 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Q3U1D9 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Q3U1D9 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Q3U1D9 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Q3U1D9 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.22■□□□□ 0.67
Q3U1D9 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Q3U1D9 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Q3U1D9 Gm15546-201ENSMUST00000122095 826 ntBASIC19.21■□□□□ 0.67
Q3U1D9 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.21■□□□□ 0.67
Q3U1D9 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Q3U1D9 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Q3U1D9 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Q3U1D9 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Q3U1D9 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Q3U1D9 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.2■□□□□ 0.66
Q3U1D9 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.2■□□□□ 0.66
Q3U1D9 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Q3U1D9 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Q3U1D9 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Q3U1D9 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Q3U1D9 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Q3U1D9 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Q3U1D9 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
Q3U1D9 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Q3U1D9 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Q3U1D9 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Q3U1D9 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Q3U1D9 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Q3U1D9 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.18■□□□□ 0.66
Q3U1D9 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Q3U1D9 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Q3U1D9 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Q3U1D9 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Q3U1D9 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.17■□□□□ 0.66
Q3U1D9 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Q3U1D9 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Q3U1D9 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.17■□□□□ 0.66
Q3U1D9 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.17■□□□□ 0.66
Q3U1D9 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Q3U1D9 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Q3U1D9 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Q3U1D9 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Q3U1D9 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.16■□□□□ 0.66
Q3U1D9 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.16■□□□□ 0.66
Q3U1D9 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Q3U1D9 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Q3U1D9 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Q3U1D9 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
Q3U1D9 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Q3U1D9 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.15■□□□□ 0.66
Q3U1D9 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Q3U1D9 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Q3U1D9 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Q3U1D9 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Q3U1D9 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Q3U1D9 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Q3U1D9 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Q3U1D9 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Q3U1D9 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Q3U1D9 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.14■□□□□ 0.65
Q3U1D9 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Q3U1D9 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Q3U1D9 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Q3U1D9 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Q3U1D9 Gm13238-201ENSMUST00000117655 780 ntBASIC19.13■□□□□ 0.65
Q3U1D9 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Q3U1D9 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Q3U1D9 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Q3U1D9 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Q3U1D9 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Q3U1D9 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Q3U1D9 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.12■□□□□ 0.65
Q3U1D9 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Q3U1D9 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
Q3U1D9 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Q3U1D9 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Q3U1D9 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.11■□□□□ 0.65
Q3U1D9 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Q3U1D9 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Q3U1D9 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.1■□□□□ 0.65
Q3U1D9 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Q3U1D9 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.1■□□□□ 0.65
Q3U1D9 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Q3U1D9 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.1■□□□□ 0.65
Q3U1D9 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Q3U1D9 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Q3U1D9 Gm15820-201ENSMUST00000201566 728 ntBASIC19.09■□□□□ 0.65
Q3U1D9 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms