Protein–RNA interactions for Protein: P86793

Ccl21c, C-C motif chemokine 21c, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl21cP86793 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccl21cP86793 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ccl21cP86793 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccl21cP86793 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccl21cP86793 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Ccl21cP86793 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ccl21cP86793 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Ccl21cP86793 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ccl21cP86793 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccl21cP86793 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccl21cP86793 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccl21cP86793 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ccl21cP86793 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccl21cP86793 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.86■□□□□ 0.61
Ccl21cP86793 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.86■□□□□ 0.61
Ccl21cP86793 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ccl21cP86793 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.86■□□□□ 0.61
Ccl21cP86793 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Ccl21cP86793 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccl21cP86793 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccl21cP86793 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccl21cP86793 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccl21cP86793 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccl21cP86793 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccl21cP86793 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccl21cP86793 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccl21cP86793 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccl21cP86793 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccl21cP86793 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Ccl21cP86793 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.83■□□□□ 0.6
Ccl21cP86793 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ccl21cP86793 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.82■□□□□ 0.6
Ccl21cP86793 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.82■□□□□ 0.6
Ccl21cP86793 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ccl21cP86793 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.81■□□□□ 0.6
Ccl21cP86793 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.81■□□□□ 0.6
Ccl21cP86793 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccl21cP86793 Gm22238-201ENSMUST00000175222 88 ntBASIC18.8■□□□□ 0.6
Ccl21cP86793 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccl21cP86793 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccl21cP86793 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccl21cP86793 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccl21cP86793 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ccl21cP86793 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.79■□□□□ 0.6
Ccl21cP86793 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Ccl21cP86793 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.79■□□□□ 0.6
Ccl21cP86793 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccl21cP86793 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccl21cP86793 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.79■□□□□ 0.6
Ccl21cP86793 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccl21cP86793 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccl21cP86793 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccl21cP86793 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccl21cP86793 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ccl21cP86793 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccl21cP86793 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ccl21cP86793 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Ccl21cP86793 AC153504.1-201ENSMUST00000218379 2290 ntBASIC18.77■□□□□ 0.6
Ccl21cP86793 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccl21cP86793 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.77■□□□□ 0.6
Ccl21cP86793 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccl21cP86793 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccl21cP86793 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ccl21cP86793 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccl21cP86793 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.76■□□□□ 0.59
Ccl21cP86793 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.76■□□□□ 0.59
Ccl21cP86793 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.76■□□□□ 0.59
Ccl21cP86793 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccl21cP86793 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ccl21cP86793 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.76■□□□□ 0.59
Ccl21cP86793 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccl21cP86793 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccl21cP86793 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccl21cP86793 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Ccl21cP86793 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccl21cP86793 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ccl21cP86793 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccl21cP86793 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Ccl21cP86793 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.74■□□□□ 0.59
Ccl21cP86793 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.74■□□□□ 0.59
Ccl21cP86793 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.74■□□□□ 0.59
Ccl21cP86793 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccl21cP86793 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ccl21cP86793 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Ccl21cP86793 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
Ccl21cP86793 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.73■□□□□ 0.59
Ccl21cP86793 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccl21cP86793 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccl21cP86793 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ccl21cP86793 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ccl21cP86793 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.72■□□□□ 0.59
Ccl21cP86793 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ccl21cP86793 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccl21cP86793 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Ccl21cP86793 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.7■□□□□ 0.58
Ccl21cP86793 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ccl21cP86793 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.7■□□□□ 0.58
Ccl21cP86793 Gm40881-201ENSMUST00000223397 166 ntBASIC18.7■□□□□ 0.58
Ccl21cP86793 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccl21cP86793 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms