Protein–RNA interactions for Protein: P70658

Cxcr4, C-X-C chemokine receptor type 4, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr4P70658 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cxcr4P70658 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cxcr4P70658 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
Cxcr4P70658 Gm45364-201ENSMUST00000210883 159 ntBASIC20.67■□□□□ 0.9
Cxcr4P70658 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cxcr4P70658 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cxcr4P70658 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cxcr4P70658 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cxcr4P70658 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Cxcr4P70658 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cxcr4P70658 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cxcr4P70658 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cxcr4P70658 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cxcr4P70658 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Cxcr4P70658 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cxcr4P70658 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Cxcr4P70658 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.64■□□□□ 0.89
Cxcr4P70658 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cxcr4P70658 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Cxcr4P70658 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.63■□□□□ 0.89
Cxcr4P70658 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cxcr4P70658 Scarna2-201ENSMUST00000157560 414 ntBASIC20.63■□□□□ 0.89
Cxcr4P70658 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cxcr4P70658 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cxcr4P70658 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.63■□□□□ 0.89
Cxcr4P70658 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cxcr4P70658 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cxcr4P70658 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cxcr4P70658 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cxcr4P70658 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cxcr4P70658 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cxcr4P70658 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cxcr4P70658 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Cxcr4P70658 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cxcr4P70658 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cxcr4P70658 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cxcr4P70658 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.61■□□□□ 0.89
Cxcr4P70658 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cxcr4P70658 Gm9806-201ENSMUST00000051080 552 ntBASIC20.61■□□□□ 0.89
Cxcr4P70658 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cxcr4P70658 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cxcr4P70658 Gm11687-201ENSMUST00000118911 886 ntBASIC20.6■□□□□ 0.89
Cxcr4P70658 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cxcr4P70658 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cxcr4P70658 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cxcr4P70658 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cxcr4P70658 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cxcr4P70658 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cxcr4P70658 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.59■□□□□ 0.89
Cxcr4P70658 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Cxcr4P70658 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cxcr4P70658 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cxcr4P70658 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cxcr4P70658 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Cxcr4P70658 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cxcr4P70658 Gm9812-201ENSMUST00000061934 968 ntBASIC20.58■□□□□ 0.89
Cxcr4P70658 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cxcr4P70658 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cxcr4P70658 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cxcr4P70658 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Cxcr4P70658 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cxcr4P70658 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cxcr4P70658 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cxcr4P70658 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Cxcr4P70658 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cxcr4P70658 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cxcr4P70658 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cxcr4P70658 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cxcr4P70658 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Cxcr4P70658 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Cxcr4P70658 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cxcr4P70658 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cxcr4P70658 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cxcr4P70658 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.55■□□□□ 0.88
Cxcr4P70658 Gm16437-201ENSMUST00000025669 507 ntBASIC20.55■□□□□ 0.88
Cxcr4P70658 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cxcr4P70658 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cxcr4P70658 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cxcr4P70658 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.54■□□□□ 0.88
Cxcr4P70658 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cxcr4P70658 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cxcr4P70658 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cxcr4P70658 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.54■□□□□ 0.88
Cxcr4P70658 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cxcr4P70658 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.54■□□□□ 0.88
Cxcr4P70658 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cxcr4P70658 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.54■□□□□ 0.88
Cxcr4P70658 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cxcr4P70658 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cxcr4P70658 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cxcr4P70658 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Cxcr4P70658 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cxcr4P70658 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.52■□□□□ 0.88
Cxcr4P70658 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.52■□□□□ 0.88
Cxcr4P70658 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cxcr4P70658 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Cxcr4P70658 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.51■□□□□ 0.87
Cxcr4P70658 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cxcr4P70658 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cxcr4P70658 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms