Protein–RNA interactions for Protein: P70441

Slc9a3r1, Na(+)/H(+) exchange regulatory cofactor NHE-RF1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc9a3r1P70441 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Slc9a3r1P70441 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Slc9a3r1P70441 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Slc9a3r1P70441 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Slc9a3r1P70441 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.14■□□□□ 0.97
Slc9a3r1P70441 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.14■□□□□ 0.97
Slc9a3r1P70441 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slc9a3r1P70441 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Slc9a3r1P70441 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.13■□□□□ 0.97
Slc9a3r1P70441 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Slc9a3r1P70441 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc9a3r1P70441 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc9a3r1P70441 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.12■□□□□ 0.97
Slc9a3r1P70441 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Slc9a3r1P70441 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc9a3r1P70441 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc9a3r1P70441 Gm5812-201ENSMUST00000061073 957 ntBASIC21.12■□□□□ 0.97
Slc9a3r1P70441 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.12■□□□□ 0.97
Slc9a3r1P70441 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Slc9a3r1P70441 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc9a3r1P70441 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc9a3r1P70441 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
Slc9a3r1P70441 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc9a3r1P70441 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Slc9a3r1P70441 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Slc9a3r1P70441 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc9a3r1P70441 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Slc9a3r1P70441 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slc9a3r1P70441 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Slc9a3r1P70441 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Slc9a3r1P70441 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Slc9a3r1P70441 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slc9a3r1P70441 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Slc9a3r1P70441 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Slc9a3r1P70441 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.09■□□□□ 0.97
Slc9a3r1P70441 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc9a3r1P70441 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.09■□□□□ 0.97
Slc9a3r1P70441 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc9a3r1P70441 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc9a3r1P70441 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc9a3r1P70441 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Slc9a3r1P70441 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc9a3r1P70441 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc9a3r1P70441 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc9a3r1P70441 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Slc9a3r1P70441 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Slc9a3r1P70441 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.08■□□□□ 0.97
Slc9a3r1P70441 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.08■□□□□ 0.97
Slc9a3r1P70441 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.08■□□□□ 0.97
Slc9a3r1P70441 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Slc9a3r1P70441 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Slc9a3r1P70441 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc9a3r1P70441 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Slc9a3r1P70441 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Slc9a3r1P70441 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc9a3r1P70441 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Slc9a3r1P70441 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc9a3r1P70441 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.05■□□□□ 0.96
Slc9a3r1P70441 Gm13238-201ENSMUST00000117655 780 ntBASIC21.05■□□□□ 0.96
Slc9a3r1P70441 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.05■□□□□ 0.96
Slc9a3r1P70441 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slc9a3r1P70441 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slc9a3r1P70441 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slc9a3r1P70441 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Slc9a3r1P70441 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Slc9a3r1P70441 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Slc9a3r1P70441 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Slc9a3r1P70441 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slc9a3r1P70441 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Slc9a3r1P70441 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Slc9a3r1P70441 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slc9a3r1P70441 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Slc9a3r1P70441 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Slc9a3r1P70441 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slc9a3r1P70441 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Slc9a3r1P70441 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Slc9a3r1P70441 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Slc9a3r1P70441 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Slc9a3r1P70441 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Slc9a3r1P70441 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Slc9a3r1P70441 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Slc9a3r1P70441 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Slc9a3r1P70441 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Slc9a3r1P70441 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Slc9a3r1P70441 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
Slc9a3r1P70441 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Slc9a3r1P70441 Gm15546-201ENSMUST00000122095 826 ntBASIC21■□□□□ 0.95
Slc9a3r1P70441 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Slc9a3r1P70441 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21■□□□□ 0.95
Slc9a3r1P70441 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Slc9a3r1P70441 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Slc9a3r1P70441 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Slc9a3r1P70441 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Slc9a3r1P70441 Gm45444-201ENSMUST00000211394 898 ntBASIC20.99■□□□□ 0.95
Slc9a3r1P70441 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Slc9a3r1P70441 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slc9a3r1P70441 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slc9a3r1P70441 Gm43566-201ENSMUST00000196851 808 ntBASIC20.98■□□□□ 0.95
Slc9a3r1P70441 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Slc9a3r1P70441 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms