Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Nkx2-6P43688 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nkx2-6P43688 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nkx2-6P43688 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Nkx2-6P43688 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Nkx2-6P43688 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nkx2-6P43688 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nkx2-6P43688 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nkx2-6P43688 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.94■□□□□ 0.94
Nkx2-6P43688 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.94■□□□□ 0.94
Nkx2-6P43688 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.94■□□□□ 0.94
Nkx2-6P43688 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Nkx2-6P43688 Gm22567-201ENSMUST00000175542 342 ntBASIC20.93■□□□□ 0.94
Nkx2-6P43688 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nkx2-6P43688 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Nkx2-6P43688 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nkx2-6P43688 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nkx2-6P43688 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Nkx2-6P43688 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.92■□□□□ 0.94
Nkx2-6P43688 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.92■□□□□ 0.94
Nkx2-6P43688 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nkx2-6P43688 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nkx2-6P43688 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Nkx2-6P43688 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nkx2-6P43688 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nkx2-6P43688 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nkx2-6P43688 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nkx2-6P43688 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nkx2-6P43688 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nkx2-6P43688 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Nkx2-6P43688 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Nkx2-6P43688 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nkx2-6P43688 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.9■□□□□ 0.94
Nkx2-6P43688 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.9■□□□□ 0.94
Nkx2-6P43688 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.9■□□□□ 0.94
Nkx2-6P43688 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nkx2-6P43688 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nkx2-6P43688 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nkx2-6P43688 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nkx2-6P43688 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Nkx2-6P43688 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Nkx2-6P43688 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Nkx2-6P43688 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.89■□□□□ 0.93
Nkx2-6P43688 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Nkx2-6P43688 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nkx2-6P43688 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nkx2-6P43688 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nkx2-6P43688 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Nkx2-6P43688 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Nkx2-6P43688 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.88■□□□□ 0.93
Nkx2-6P43688 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Nkx2-6P43688 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nkx2-6P43688 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nkx2-6P43688 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nkx2-6P43688 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.87■□□□□ 0.93
Nkx2-6P43688 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nkx2-6P43688 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Nkx2-6P43688 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nkx2-6P43688 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nkx2-6P43688 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.86■□□□□ 0.93
Nkx2-6P43688 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nkx2-6P43688 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Nkx2-6P43688 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Nkx2-6P43688 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Nkx2-6P43688 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.86■□□□□ 0.93
Nkx2-6P43688 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Nkx2-6P43688 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.86■□□□□ 0.93
Nkx2-6P43688 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Nkx2-6P43688 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Nkx2-6P43688 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Nkx2-6P43688 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nkx2-6P43688 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.85■□□□□ 0.93
Nkx2-6P43688 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nkx2-6P43688 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nkx2-6P43688 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.85■□□□□ 0.93
Nkx2-6P43688 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nkx2-6P43688 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Nkx2-6P43688 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nkx2-6P43688 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Nkx2-6P43688 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.84■□□□□ 0.93
Nkx2-6P43688 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nkx2-6P43688 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nkx2-6P43688 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Nkx2-6P43688 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.82■□□□□ 0.92
Nkx2-6P43688 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Nkx2-6P43688 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nkx2-6P43688 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nkx2-6P43688 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx2-6P43688 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx2-6P43688 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx2-6P43688 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.8■□□□□ 0.92
Nkx2-6P43688 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx2-6P43688 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Nkx2-6P43688 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Nkx2-6P43688 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx2-6P43688 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nkx2-6P43688 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.79■□□□□ 0.92
Nkx2-6P43688 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.79■□□□□ 0.92
Nkx2-6P43688 Gm15820-201ENSMUST00000201566 728 ntBASIC20.79■□□□□ 0.92
Nkx2-6P43688 Gm45102-201ENSMUST00000207427 857 ntBASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 9.6 ms