Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sftpa1P35242 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sftpa1P35242 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.7■□□□□ 0.9
Sftpa1P35242 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Sftpa1P35242 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Sftpa1P35242 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Sftpa1P35242 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sftpa1P35242 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sftpa1P35242 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sftpa1P35242 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sftpa1P35242 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sftpa1P35242 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sftpa1P35242 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sftpa1P35242 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.68■□□□□ 0.9
Sftpa1P35242 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.68■□□□□ 0.9
Sftpa1P35242 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sftpa1P35242 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Sftpa1P35242 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sftpa1P35242 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Sftpa1P35242 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.67■□□□□ 0.9
Sftpa1P35242 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.67■□□□□ 0.9
Sftpa1P35242 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Sftpa1P35242 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Sftpa1P35242 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sftpa1P35242 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Sftpa1P35242 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.66■□□□□ 0.9
Sftpa1P35242 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sftpa1P35242 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sftpa1P35242 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sftpa1P35242 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Sftpa1P35242 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sftpa1P35242 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.65■□□□□ 0.9
Sftpa1P35242 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Sftpa1P35242 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sftpa1P35242 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sftpa1P35242 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.64■□□□□ 0.89
Sftpa1P35242 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Sftpa1P35242 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sftpa1P35242 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sftpa1P35242 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.63■□□□□ 0.89
Sftpa1P35242 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.63■□□□□ 0.89
Sftpa1P35242 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Sftpa1P35242 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.62■□□□□ 0.89
Sftpa1P35242 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Sftpa1P35242 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Sftpa1P35242 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sftpa1P35242 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sftpa1P35242 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Sftpa1P35242 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Sftpa1P35242 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Sftpa1P35242 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.6■□□□□ 0.89
Sftpa1P35242 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
Sftpa1P35242 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Sftpa1P35242 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
Sftpa1P35242 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Sftpa1P35242 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sftpa1P35242 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.59■□□□□ 0.89
Sftpa1P35242 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Sftpa1P35242 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sftpa1P35242 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.58■□□□□ 0.89
Sftpa1P35242 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sftpa1P35242 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sftpa1P35242 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sftpa1P35242 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sftpa1P35242 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.56■□□□□ 0.88
Sftpa1P35242 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sftpa1P35242 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sftpa1P35242 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sftpa1P35242 Gm7417-201ENSMUST00000192950 473 ntBASIC20.55■□□□□ 0.88
Sftpa1P35242 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.55■□□□□ 0.88
Sftpa1P35242 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sftpa1P35242 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sftpa1P35242 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.54■□□□□ 0.88
Sftpa1P35242 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.53■□□□□ 0.88
Sftpa1P35242 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sftpa1P35242 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.52■□□□□ 0.88
Sftpa1P35242 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sftpa1P35242 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.52■□□□□ 0.88
Sftpa1P35242 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.52■□□□□ 0.88
Sftpa1P35242 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.52■□□□□ 0.88
Sftpa1P35242 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.52■□□□□ 0.88
Sftpa1P35242 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sftpa1P35242 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sftpa1P35242 Gm13241-201ENSMUST00000094493 780 ntBASIC20.52■□□□□ 0.88
Sftpa1P35242 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sftpa1P35242 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Sftpa1P35242 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.51■□□□□ 0.87
Sftpa1P35242 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.51■□□□□ 0.87
Sftpa1P35242 Serp2-204ENSMUST00000228055 705 ntBASIC20.51■□□□□ 0.87
Sftpa1P35242 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sftpa1P35242 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sftpa1P35242 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Sftpa1P35242 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sftpa1P35242 Gm21956-201ENSMUST00000179946 522 ntBASIC20.5■□□□□ 0.87
Sftpa1P35242 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sftpa1P35242 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sftpa1P35242 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.5■□□□□ 0.87
Sftpa1P35242 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Sftpa1P35242 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Sftpa1P35242 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms