Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rom1P32958 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.53■□□□□ 0.4
Rom1P32958 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Rom1P32958 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rom1P32958 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC17.52■□□□□ 0.4
Rom1P32958 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rom1P32958 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Rom1P32958 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rom1P32958 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Rom1P32958 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rom1P32958 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rom1P32958 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rom1P32958 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rom1P32958 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC17.51■□□□□ 0.39
Rom1P32958 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rom1P32958 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.5■□□□□ 0.39
Rom1P32958 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rom1P32958 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rom1P32958 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rom1P32958 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rom1P32958 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.5■□□□□ 0.39
Rom1P32958 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rom1P32958 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rom1P32958 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rom1P32958 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rom1P32958 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rom1P32958 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Rom1P32958 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rom1P32958 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rom1P32958 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rom1P32958 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rom1P32958 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rom1P32958 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rom1P32958 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rom1P32958 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rom1P32958 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rom1P32958 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rom1P32958 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
Rom1P32958 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.48■□□□□ 0.39
Rom1P32958 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.47■□□□□ 0.39
Rom1P32958 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rom1P32958 Gm9910-201ENSMUST00000195385 1550 ntBASIC17.47■□□□□ 0.39
Rom1P32958 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Rom1P32958 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Rom1P32958 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rom1P32958 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Rom1P32958 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC17.46■□□□□ 0.39
Rom1P32958 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rom1P32958 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rom1P32958 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Rom1P32958 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rom1P32958 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rom1P32958 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.46■□□□□ 0.39
Rom1P32958 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rom1P32958 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rom1P32958 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.45■□□□□ 0.38
Rom1P32958 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC17.45■□□□□ 0.38
Rom1P32958 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Rom1P32958 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.44■□□□□ 0.38
Rom1P32958 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Rom1P32958 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rom1P32958 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rom1P32958 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rom1P32958 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rom1P32958 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rom1P32958 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rom1P32958 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rom1P32958 Gm37136-201ENSMUST00000194368 194 ntBASIC17.42■□□□□ 0.38
Rom1P32958 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rom1P32958 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Rom1P32958 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rom1P32958 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rom1P32958 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rom1P32958 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.41■□□□□ 0.38
Rom1P32958 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.41■□□□□ 0.38
Rom1P32958 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rom1P32958 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.41■□□□□ 0.38
Rom1P32958 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rom1P32958 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rom1P32958 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.4■□□□□ 0.38
Rom1P32958 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rom1P32958 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Rom1P32958 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Rom1P32958 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rom1P32958 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rom1P32958 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rom1P32958 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rom1P32958 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rom1P32958 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rom1P32958 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Rom1P32958 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rom1P32958 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rom1P32958 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rom1P32958 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rom1P32958 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rom1P32958 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rom1P32958 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Rom1P32958 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.38■□□□□ 0.37
Rom1P32958 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rom1P32958 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms