Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Slc6a11P31650 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Slc6a11P31650 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Slc6a11P31650 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Slc6a11P31650 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Slc6a11P31650 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Slc6a11P31650 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc6a11P31650 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Slc6a11P31650 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc6a11P31650 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Slc6a11P31650 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Slc6a11P31650 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc6a11P31650 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc6a11P31650 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc6a11P31650 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
Slc6a11P31650 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.88■□□□□ 0.93
Slc6a11P31650 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Slc6a11P31650 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Slc6a11P31650 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.87■□□□□ 0.93
Slc6a11P31650 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Slc6a11P31650 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc6a11P31650 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc6a11P31650 Gm11687-201ENSMUST00000118911 886 ntBASIC20.86■□□□□ 0.93
Slc6a11P31650 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Slc6a11P31650 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc6a11P31650 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc6a11P31650 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc6a11P31650 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc6a11P31650 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Slc6a11P31650 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc6a11P31650 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Slc6a11P31650 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Slc6a11P31650 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc6a11P31650 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc6a11P31650 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.84■□□□□ 0.93
Slc6a11P31650 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Slc6a11P31650 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Slc6a11P31650 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Slc6a11P31650 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Slc6a11P31650 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.83■□□□□ 0.93
Slc6a11P31650 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Slc6a11P31650 Scarna2-201ENSMUST00000157560 414 ntBASIC20.83■□□□□ 0.93
Slc6a11P31650 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.83■□□□□ 0.92
Slc6a11P31650 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc6a11P31650 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc6a11P31650 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Slc6a11P31650 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc6a11P31650 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc6a11P31650 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc6a11P31650 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.81■□□□□ 0.92
Slc6a11P31650 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Slc6a11P31650 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc6a11P31650 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc6a11P31650 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.81■□□□□ 0.92
Slc6a11P31650 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc6a11P31650 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Slc6a11P31650 Gm9806-201ENSMUST00000051080 552 ntBASIC20.8■□□□□ 0.92
Slc6a11P31650 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.8■□□□□ 0.92
Slc6a11P31650 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.8■□□□□ 0.92
Slc6a11P31650 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Slc6a11P31650 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slc6a11P31650 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slc6a11P31650 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slc6a11P31650 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Slc6a11P31650 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slc6a11P31650 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slc6a11P31650 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.78■□□□□ 0.92
Slc6a11P31650 Gm12366-201ENSMUST00000121722 873 ntBASIC20.78■□□□□ 0.92
Slc6a11P31650 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.78■□□□□ 0.92
Slc6a11P31650 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.78■□□□□ 0.92
Slc6a11P31650 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.78■□□□□ 0.92
Slc6a11P31650 Gm5786-201ENSMUST00000085368 882 ntBASIC20.78■□□□□ 0.92
Slc6a11P31650 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Slc6a11P31650 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slc6a11P31650 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slc6a11P31650 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Slc6a11P31650 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.77■□□□□ 0.91
Slc6a11P31650 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc6a11P31650 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc6a11P31650 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Slc6a11P31650 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Slc6a11P31650 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Slc6a11P31650 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc6a11P31650 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc6a11P31650 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.75■□□□□ 0.91
Slc6a11P31650 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.75■□□□□ 0.91
Slc6a11P31650 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc6a11P31650 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.75■□□□□ 0.91
Slc6a11P31650 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc6a11P31650 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc6a11P31650 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.74■□□□□ 0.91
Slc6a11P31650 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc6a11P31650 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc6a11P31650 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc6a11P31650 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc6a11P31650 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Slc6a11P31650 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc6a11P31650 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.73■□□□□ 0.91
Slc6a11P31650 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slc6a11P31650 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms