Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cd28P31041 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cd28P31041 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cd28P31041 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cd28P31041 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cd28P31041 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Cd28P31041 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Cd28P31041 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Cd28P31041 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Cd28P31041 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.44■□□□□ 0.7
Cd28P31041 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.44■□□□□ 0.7
Cd28P31041 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cd28P31041 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cd28P31041 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Cd28P31041 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cd28P31041 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.44■□□□□ 0.7
Cd28P31041 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.44■□□□□ 0.7
Cd28P31041 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cd28P31041 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cd28P31041 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cd28P31041 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cd28P31041 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cd28P31041 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cd28P31041 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cd28P31041 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cd28P31041 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Cd28P31041 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cd28P31041 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.42■□□□□ 0.7
Cd28P31041 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cd28P31041 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Cd28P31041 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cd28P31041 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.42■□□□□ 0.7
Cd28P31041 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Cd28P31041 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cd28P31041 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cd28P31041 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cd28P31041 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cd28P31041 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Cd28P31041 Gm37136-201ENSMUST00000194368 194 ntBASIC19.41■□□□□ 0.7
Cd28P31041 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cd28P31041 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cd28P31041 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Cd28P31041 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cd28P31041 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cd28P31041 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cd28P31041 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cd28P31041 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cd28P31041 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cd28P31041 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.39■□□□□ 0.7
Cd28P31041 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cd28P31041 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cd28P31041 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cd28P31041 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cd28P31041 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cd28P31041 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cd28P31041 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cd28P31041 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cd28P31041 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Cd28P31041 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.37■□□□□ 0.69
Cd28P31041 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cd28P31041 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cd28P31041 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cd28P31041 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cd28P31041 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cd28P31041 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cd28P31041 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.36■□□□□ 0.69
Cd28P31041 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cd28P31041 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cd28P31041 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.35■□□□□ 0.69
Cd28P31041 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cd28P31041 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cd28P31041 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cd28P31041 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cd28P31041 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cd28P31041 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cd28P31041 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.33■□□□□ 0.69
Cd28P31041 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.33■□□□□ 0.68
Cd28P31041 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
Cd28P31041 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cd28P31041 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cd28P31041 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cd28P31041 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cd28P31041 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cd28P31041 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cd28P31041 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cd28P31041 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cd28P31041 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cd28P31041 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cd28P31041 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Cd28P31041 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Cd28P31041 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cd28P31041 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cd28P31041 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cd28P31041 Nkain2-201ENSMUST00000092602 558 ntBASIC19.31■□□□□ 0.68
Cd28P31041 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cd28P31041 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.31■□□□□ 0.68
Cd28P31041 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cd28P31041 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cd28P31041 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
Cd28P31041 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms