Protein–RNA interactions for Protein: P09022

Hoxa1, Homeobox protein Hox-A1, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa1P09022 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hoxa1P09022 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Hoxa1P09022 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hoxa1P09022 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hoxa1P09022 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Hoxa1P09022 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Hoxa1P09022 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Hoxa1P09022 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Hoxa1P09022 Gm9812-201ENSMUST00000061934 968 ntBASIC17.9■□□□□ 0.46
Hoxa1P09022 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.9■□□□□ 0.46
Hoxa1P09022 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hoxa1P09022 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hoxa1P09022 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Hoxa1P09022 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hoxa1P09022 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Hoxa1P09022 Gm11599-201ENSMUST00000118720 878 ntBASIC17.89■□□□□ 0.45
Hoxa1P09022 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Hoxa1P09022 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Hoxa1P09022 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hoxa1P09022 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hoxa1P09022 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hoxa1P09022 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hoxa1P09022 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hoxa1P09022 Mir3960-201ENSMUST00000198213 73 ntBASIC17.88■□□□□ 0.45
Hoxa1P09022 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hoxa1P09022 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Hoxa1P09022 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hoxa1P09022 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.87■□□□□ 0.45
Hoxa1P09022 AC154454.1-201ENSMUST00000225253 216 ntBASIC17.87■□□□□ 0.45
Hoxa1P09022 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hoxa1P09022 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Hoxa1P09022 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Hoxa1P09022 AC122317.2-201ENSMUST00000218708 1248 ntBASIC17.86■□□□□ 0.45
Hoxa1P09022 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hoxa1P09022 Gm12818-201ENSMUST00000117562 1349 ntBASIC17.86■□□□□ 0.45
Hoxa1P09022 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Hoxa1P09022 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hoxa1P09022 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Hoxa1P09022 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hoxa1P09022 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Hoxa1P09022 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Hoxa1P09022 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Hoxa1P09022 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.85■□□□□ 0.45
Hoxa1P09022 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Hoxa1P09022 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Hoxa1P09022 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hoxa1P09022 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Hoxa1P09022 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hoxa1P09022 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.84■□□□□ 0.45
Hoxa1P09022 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Hoxa1P09022 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hoxa1P09022 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hoxa1P09022 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hoxa1P09022 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hoxa1P09022 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Hoxa1P09022 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hoxa1P09022 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hoxa1P09022 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.84■□□□□ 0.45
Hoxa1P09022 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.83■□□□□ 0.45
Hoxa1P09022 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.83■□□□□ 0.45
Hoxa1P09022 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hoxa1P09022 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hoxa1P09022 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hoxa1P09022 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Hoxa1P09022 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Hoxa1P09022 Gm45364-201ENSMUST00000210883 159 ntBASIC17.82■□□□□ 0.44
Hoxa1P09022 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hoxa1P09022 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hoxa1P09022 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hoxa1P09022 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.82■□□□□ 0.44
Hoxa1P09022 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hoxa1P09022 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hoxa1P09022 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Hoxa1P09022 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Hoxa1P09022 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.81■□□□□ 0.44
Hoxa1P09022 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Hoxa1P09022 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxa1P09022 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxa1P09022 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxa1P09022 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Hoxa1P09022 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Hoxa1P09022 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxa1P09022 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC17.79■□□□□ 0.44
Hoxa1P09022 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.79■□□□□ 0.44
Hoxa1P09022 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxa1P09022 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Hoxa1P09022 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.78■□□□□ 0.44
Hoxa1P09022 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxa1P09022 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Hoxa1P09022 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
Hoxa1P09022 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.78■□□□□ 0.44
Hoxa1P09022 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxa1P09022 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxa1P09022 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.78■□□□□ 0.44
Hoxa1P09022 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxa1P09022 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxa1P09022 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Hoxa1P09022 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxa1P09022 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Hoxa1P09022 Terc-201ENSMUST00000082862 423 ntBASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms