Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
P06328 Gm9812-201ENSMUST00000061934 968 ntBASIC16.16■□□□□ 0.18
P06328 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P06328 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
P06328 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
P06328 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
P06328 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC16.15■□□□□ 0.18
P06328 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
P06328 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
P06328 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
P06328 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
P06328 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
P06328 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
P06328 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC16.14■□□□□ 0.17
P06328 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
P06328 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
P06328 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
P06328 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
P06328 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
P06328 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
P06328 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC16.13■□□□□ 0.17
P06328 Mir3960-201ENSMUST00000198213 73 ntBASIC16.13■□□□□ 0.17
P06328 AC122317.2-201ENSMUST00000218708 1248 ntBASIC16.13■□□□□ 0.17
P06328 AC153911.1-201ENSMUST00000220378 758 ntBASIC16.13■□□□□ 0.17
P06328 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
P06328 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
P06328 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
P06328 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
P06328 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
P06328 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
P06328 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
P06328 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
P06328 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC16.12■□□□□ 0.17
P06328 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
P06328 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
P06328 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
P06328 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
P06328 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC16.11■□□□□ 0.17
P06328 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
P06328 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P06328 Gm12818-201ENSMUST00000117562 1349 ntBASIC16.11■□□□□ 0.17
P06328 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
P06328 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
P06328 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
P06328 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
P06328 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC16.11■□□□□ 0.17
P06328 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC16.1■□□□□ 0.17
P06328 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P06328 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P06328 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
P06328 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
P06328 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P06328 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
P06328 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
P06328 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P06328 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P06328 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
P06328 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
P06328 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P06328 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
P06328 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
P06328 Gm28731-201ENSMUST00000185564 1569 ntBASIC16.09■□□□□ 0.17
P06328 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
P06328 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
P06328 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC16.09■□□□□ 0.17
P06328 AC154454.1-201ENSMUST00000225253 216 ntBASIC16.09■□□□□ 0.17
P06328 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
P06328 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
P06328 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
P06328 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC16.08■□□□□ 0.16
P06328 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC16.08■□□□□ 0.16
P06328 Gm7432-201ENSMUST00000210343 879 ntBASIC16.08■□□□□ 0.16
P06328 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
P06328 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
P06328 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
P06328 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
P06328 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
P06328 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
P06328 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
P06328 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
P06328 Gm45364-201ENSMUST00000210883 159 ntBASIC16.07■□□□□ 0.16
P06328 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
P06328 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
P06328 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
P06328 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
P06328 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
P06328 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
P06328 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC16.06■□□□□ 0.16
P06328 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
P06328 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
P06328 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
P06328 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC16.06■□□□□ 0.16
P06328 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
P06328 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
P06328 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
P06328 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
P06328 Terc-201ENSMUST00000082862 423 ntBASIC16.05■□□□□ 0.16
P06328 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
P06328 Gm11599-201ENSMUST00000118720 878 ntBASIC16.04■□□□□ 0.16
P06328 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms