Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Krt1P04104 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Krt1P04104 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Krt1P04104 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.97■□□□□ 0.95
Krt1P04104 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Krt1P04104 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Krt1P04104 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Krt1P04104 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
Krt1P04104 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Krt1P04104 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Krt1P04104 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Krt1P04104 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Krt1P04104 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Krt1P04104 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Krt1P04104 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Krt1P04104 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Krt1P04104 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Krt1P04104 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Krt1P04104 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Krt1P04104 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Krt1P04104 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Krt1P04104 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Krt1P04104 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Krt1P04104 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Krt1P04104 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Krt1P04104 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Krt1P04104 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Krt1P04104 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Krt1P04104 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Krt1P04104 Gm24804-201ENSMUST00000174982 85 ntBASIC20.91■□□□□ 0.94
Krt1P04104 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Krt1P04104 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Krt1P04104 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Krt1P04104 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Krt1P04104 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Krt1P04104 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Krt1P04104 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Krt1P04104 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Krt1P04104 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.89■□□□□ 0.94
Krt1P04104 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.89■□□□□ 0.93
Krt1P04104 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Krt1P04104 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.89■□□□□ 0.93
Krt1P04104 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Krt1P04104 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Krt1P04104 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Krt1P04104 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Krt1P04104 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Krt1P04104 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Krt1P04104 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Krt1P04104 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Krt1P04104 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Krt1P04104 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Krt1P04104 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Krt1P04104 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Krt1P04104 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Krt1P04104 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Krt1P04104 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Krt1P04104 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.86■□□□□ 0.93
Krt1P04104 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Krt1P04104 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Krt1P04104 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Krt1P04104 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Krt1P04104 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Krt1P04104 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Krt1P04104 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Krt1P04104 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Krt1P04104 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Krt1P04104 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Krt1P04104 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Krt1P04104 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Krt1P04104 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Krt1P04104 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Krt1P04104 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.84■□□□□ 0.93
Krt1P04104 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Krt1P04104 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Krt1P04104 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.84■□□□□ 0.93
Krt1P04104 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Krt1P04104 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Krt1P04104 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Krt1P04104 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Krt1P04104 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Krt1P04104 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Krt1P04104 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.83■□□□□ 0.92
Krt1P04104 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.92
Krt1P04104 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Krt1P04104 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.82■□□□□ 0.92
Krt1P04104 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Krt1P04104 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Krt1P04104 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Krt1P04104 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Krt1P04104 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Krt1P04104 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Krt1P04104 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Krt1P04104 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
Krt1P04104 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.8■□□□□ 0.92
Krt1P04104 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Krt1P04104 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Krt1P04104 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Krt1P04104 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.79■□□□□ 0.92
Krt1P04104 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms