Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.44■□□□□ 0.54
Hoxa3P02831 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hoxa3P02831 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.43■□□□□ 0.54
Hoxa3P02831 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hoxa3P02831 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hoxa3P02831 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Hoxa3P02831 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hoxa3P02831 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Hoxa3P02831 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hoxa3P02831 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hoxa3P02831 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.42■□□□□ 0.54
Hoxa3P02831 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hoxa3P02831 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hoxa3P02831 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.41■□□□□ 0.54
Hoxa3P02831 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hoxa3P02831 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hoxa3P02831 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
Hoxa3P02831 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hoxa3P02831 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Hoxa3P02831 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Hoxa3P02831 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hoxa3P02831 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Hoxa3P02831 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hoxa3P02831 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.39■□□□□ 0.53
Hoxa3P02831 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hoxa3P02831 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Hoxa3P02831 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Hoxa3P02831 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hoxa3P02831 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hoxa3P02831 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hoxa3P02831 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hoxa3P02831 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Hoxa3P02831 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hoxa3P02831 Gm5921-201ENSMUST00000075898 882 ntBASIC18.38■□□□□ 0.53
Hoxa3P02831 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hoxa3P02831 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hoxa3P02831 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hoxa3P02831 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hoxa3P02831 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.37■□□□□ 0.53
Hoxa3P02831 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hoxa3P02831 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hoxa3P02831 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hoxa3P02831 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.37■□□□□ 0.53
Hoxa3P02831 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Hoxa3P02831 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hoxa3P02831 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.36■□□□□ 0.53
Hoxa3P02831 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hoxa3P02831 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hoxa3P02831 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hoxa3P02831 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hoxa3P02831 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hoxa3P02831 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hoxa3P02831 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.34■□□□□ 0.53
Hoxa3P02831 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hoxa3P02831 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hoxa3P02831 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hoxa3P02831 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hoxa3P02831 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Hoxa3P02831 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Hoxa3P02831 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.33■□□□□ 0.52
Hoxa3P02831 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hoxa3P02831 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hoxa3P02831 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hoxa3P02831 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Hoxa3P02831 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hoxa3P02831 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.32■□□□□ 0.52
Hoxa3P02831 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hoxa3P02831 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hoxa3P02831 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hoxa3P02831 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Hoxa3P02831 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hoxa3P02831 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hoxa3P02831 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.31■□□□□ 0.52
Hoxa3P02831 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hoxa3P02831 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hoxa3P02831 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.3■□□□□ 0.52
Hoxa3P02831 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Hoxa3P02831 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Hoxa3P02831 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hoxa3P02831 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hoxa3P02831 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hoxa3P02831 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Hoxa3P02831 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hoxa3P02831 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Hoxa3P02831 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Hoxa3P02831 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Hoxa3P02831 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hoxa3P02831 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hoxa3P02831 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.29■□□□□ 0.52
Hoxa3P02831 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.28■□□□□ 0.52
Hoxa3P02831 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.28■□□□□ 0.52
Hoxa3P02831 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxa3P02831 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxa3P02831 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Hoxa3P02831 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.28■□□□□ 0.52
Hoxa3P02831 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Hoxa3P02831 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxa3P02831 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.28■□□□□ 0.52
Hoxa3P02831 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Hoxa3P02831 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms