Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
P01788 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
P01788 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P01788 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
P01788 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.42■□□□□ 0.38
P01788 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
P01788 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P01788 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P01788 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
P01788 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
P01788 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P01788 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P01788 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
P01788 Gm6821-201ENSMUST00000107540 542 ntBASIC17.41■□□□□ 0.38
P01788 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
P01788 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P01788 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
P01788 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
P01788 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.4■□□□□ 0.38
P01788 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
P01788 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC17.4■□□□□ 0.38
P01788 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
P01788 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
P01788 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
P01788 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
P01788 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
P01788 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
P01788 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
P01788 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
P01788 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
P01788 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
P01788 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
P01788 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
P01788 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
P01788 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
P01788 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
P01788 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
P01788 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
P01788 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
P01788 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
P01788 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
P01788 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
P01788 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
P01788 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
P01788 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
P01788 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
P01788 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P01788 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC17.35■□□□□ 0.37
P01788 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
P01788 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P01788 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P01788 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.35■□□□□ 0.37
P01788 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
P01788 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.34■□□□□ 0.37
P01788 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
P01788 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
P01788 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
P01788 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
P01788 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
P01788 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC17.33■□□□□ 0.36
P01788 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC17.33■□□□□ 0.36
P01788 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
P01788 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.33■□□□□ 0.36
P01788 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
P01788 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P01788 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
P01788 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.32■□□□□ 0.36
P01788 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P01788 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC17.32■□□□□ 0.36
P01788 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P01788 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P01788 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
P01788 AC131739.1-201ENSMUST00000221692 1245 ntBASIC17.31■□□□□ 0.36
P01788 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.31■□□□□ 0.36
P01788 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
P01788 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
P01788 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
P01788 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P01788 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P01788 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P01788 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
P01788 Gm4799-201ENSMUST00000095396 657 ntBASIC17.3■□□□□ 0.36
P01788 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P01788 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
P01788 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P01788 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
P01788 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.29■□□□□ 0.36
P01788 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
P01788 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.29■□□□□ 0.36
P01788 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC17.29■□□□□ 0.36
P01788 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
P01788 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
P01788 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P01788 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
P01788 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P01788 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
P01788 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.29■□□□□ 0.36
P01788 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.28■□□□□ 0.36
P01788 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
P01788 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms