Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Igh-VJ558P01758 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Igh-VJ558P01758 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Igh-VJ558P01758 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Igh-VJ558P01758 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Igh-VJ558P01758 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Igh-VJ558P01758 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Igh-VJ558P01758 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Igh-VJ558P01758 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.22■□□□□ 0.67
Igh-VJ558P01758 Scarna2-201ENSMUST00000157560 414 ntBASIC19.22■□□□□ 0.67
Igh-VJ558P01758 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Igh-VJ558P01758 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Igh-VJ558P01758 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Igh-VJ558P01758 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Igh-VJ558P01758 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Igh-VJ558P01758 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.21■□□□□ 0.67
Igh-VJ558P01758 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.21■□□□□ 0.67
Igh-VJ558P01758 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Igh-VJ558P01758 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Igh-VJ558P01758 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Igh-VJ558P01758 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Igh-VJ558P01758 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Igh-VJ558P01758 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Igh-VJ558P01758 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Igh-VJ558P01758 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Igh-VJ558P01758 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Igh-VJ558P01758 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Igh-VJ558P01758 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Igh-VJ558P01758 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Igh-VJ558P01758 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Igh-VJ558P01758 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.2■□□□□ 0.66
Igh-VJ558P01758 Gm9806-201ENSMUST00000051080 552 ntBASIC19.2■□□□□ 0.66
Igh-VJ558P01758 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Igh-VJ558P01758 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Igh-VJ558P01758 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Igh-VJ558P01758 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Igh-VJ558P01758 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Igh-VJ558P01758 Gm44428-201ENSMUST00000204474 874 ntBASIC19.19■□□□□ 0.66
Igh-VJ558P01758 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.19■□□□□ 0.66
Igh-VJ558P01758 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Igh-VJ558P01758 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Igh-VJ558P01758 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Igh-VJ558P01758 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Igh-VJ558P01758 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Igh-VJ558P01758 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Igh-VJ558P01758 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.19■□□□□ 0.66
Igh-VJ558P01758 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Igh-VJ558P01758 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Igh-VJ558P01758 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.18■□□□□ 0.66
Igh-VJ558P01758 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Igh-VJ558P01758 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Igh-VJ558P01758 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.18■□□□□ 0.66
Igh-VJ558P01758 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Igh-VJ558P01758 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Igh-VJ558P01758 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Igh-VJ558P01758 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.17■□□□□ 0.66
Igh-VJ558P01758 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Igh-VJ558P01758 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Igh-VJ558P01758 Gm16437-201ENSMUST00000025669 507 ntBASIC19.17■□□□□ 0.66
Igh-VJ558P01758 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Igh-VJ558P01758 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Igh-VJ558P01758 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Igh-VJ558P01758 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Igh-VJ558P01758 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Igh-VJ558P01758 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Igh-VJ558P01758 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Igh-VJ558P01758 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Igh-VJ558P01758 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Igh-VJ558P01758 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Igh-VJ558P01758 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Igh-VJ558P01758 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Igh-VJ558P01758 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Igh-VJ558P01758 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Igh-VJ558P01758 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Igh-VJ558P01758 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Igh-VJ558P01758 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Igh-VJ558P01758 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Igh-VJ558P01758 Gm22567-201ENSMUST00000175542 342 ntBASIC19.13■□□□□ 0.65
Igh-VJ558P01758 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.13■□□□□ 0.65
Igh-VJ558P01758 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Igh-VJ558P01758 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Igh-VJ558P01758 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Igh-VJ558P01758 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Igh-VJ558P01758 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Igh-VJ558P01758 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Igh-VJ558P01758 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Igh-VJ558P01758 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Igh-VJ558P01758 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Igh-VJ558P01758 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Igh-VJ558P01758 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Igh-VJ558P01758 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.11■□□□□ 0.65
Igh-VJ558P01758 Gm11687-201ENSMUST00000118911 886 ntBASIC19.11■□□□□ 0.65
Igh-VJ558P01758 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Igh-VJ558P01758 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Igh-VJ558P01758 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Igh-VJ558P01758 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.1■□□□□ 0.65
Igh-VJ558P01758 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Igh-VJ558P01758 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Igh-VJ558P01758 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Igh-VJ558P01758 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms