Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tulp3O88413 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.59■□□□□ 0.89
Tulp3O88413 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Tulp3O88413 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Tulp3O88413 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tulp3O88413 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tulp3O88413 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Tulp3O88413 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.58■□□□□ 0.89
Tulp3O88413 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tulp3O88413 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Tulp3O88413 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tulp3O88413 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tulp3O88413 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tulp3O88413 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tulp3O88413 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tulp3O88413 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Tulp3O88413 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tulp3O88413 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tulp3O88413 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tulp3O88413 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tulp3O88413 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Tulp3O88413 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tulp3O88413 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.55■□□□□ 0.88
Tulp3O88413 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tulp3O88413 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tulp3O88413 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.55■□□□□ 0.88
Tulp3O88413 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.55■□□□□ 0.88
Tulp3O88413 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tulp3O88413 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tulp3O88413 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
Tulp3O88413 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Tulp3O88413 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.54■□□□□ 0.88
Tulp3O88413 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tulp3O88413 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Tulp3O88413 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Tulp3O88413 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tulp3O88413 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.53■□□□□ 0.88
Tulp3O88413 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.53■□□□□ 0.88
Tulp3O88413 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Tulp3O88413 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Tulp3O88413 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Tulp3O88413 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.52■□□□□ 0.88
Tulp3O88413 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Tulp3O88413 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Tulp3O88413 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tulp3O88413 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tulp3O88413 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.51■□□□□ 0.87
Tulp3O88413 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tulp3O88413 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.5■□□□□ 0.87
Tulp3O88413 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tulp3O88413 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tulp3O88413 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tulp3O88413 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Tulp3O88413 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tulp3O88413 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Tulp3O88413 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tulp3O88413 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tulp3O88413 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.48■□□□□ 0.87
Tulp3O88413 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Tulp3O88413 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tulp3O88413 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.47■□□□□ 0.87
Tulp3O88413 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tulp3O88413 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.47■□□□□ 0.87
Tulp3O88413 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.47■□□□□ 0.87
Tulp3O88413 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tulp3O88413 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tulp3O88413 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Tulp3O88413 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Tulp3O88413 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tulp3O88413 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tulp3O88413 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.46■□□□□ 0.87
Tulp3O88413 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tulp3O88413 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tulp3O88413 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tulp3O88413 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tulp3O88413 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tulp3O88413 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Tulp3O88413 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tulp3O88413 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tulp3O88413 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Tulp3O88413 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tulp3O88413 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Tulp3O88413 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Tulp3O88413 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tulp3O88413 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Tulp3O88413 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tulp3O88413 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tulp3O88413 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Tulp3O88413 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tulp3O88413 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tulp3O88413 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.43■□□□□ 0.86
Tulp3O88413 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Tulp3O88413 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
Tulp3O88413 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tulp3O88413 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Tulp3O88413 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tulp3O88413 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tulp3O88413 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tulp3O88413 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Tulp3O88413 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms