Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Vti1bO88384 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vti1bO88384 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vti1bO88384 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vti1bO88384 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Vti1bO88384 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vti1bO88384 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vti1bO88384 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vti1bO88384 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.91■□□□□ 0.94
Vti1bO88384 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.91■□□□□ 0.94
Vti1bO88384 Mir3960-201ENSMUST00000198213 73 ntBASIC20.91■□□□□ 0.94
Vti1bO88384 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vti1bO88384 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Vti1bO88384 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vti1bO88384 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.9■□□□□ 0.94
Vti1bO88384 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.9■□□□□ 0.94
Vti1bO88384 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vti1bO88384 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Vti1bO88384 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Vti1bO88384 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.89■□□□□ 0.93
Vti1bO88384 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.89■□□□□ 0.93
Vti1bO88384 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Vti1bO88384 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Vti1bO88384 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Vti1bO88384 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Vti1bO88384 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Vti1bO88384 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vti1bO88384 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vti1bO88384 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Vti1bO88384 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vti1bO88384 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vti1bO88384 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.87■□□□□ 0.93
Vti1bO88384 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.87■□□□□ 0.93
Vti1bO88384 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vti1bO88384 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Vti1bO88384 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vti1bO88384 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vti1bO88384 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.86■□□□□ 0.93
Vti1bO88384 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Vti1bO88384 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vti1bO88384 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.86■□□□□ 0.93
Vti1bO88384 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Vti1bO88384 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vti1bO88384 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vti1bO88384 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vti1bO88384 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vti1bO88384 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vti1bO88384 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vti1bO88384 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.85■□□□□ 0.93
Vti1bO88384 Gm45364-201ENSMUST00000210883 159 ntBASIC20.85■□□□□ 0.93
Vti1bO88384 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.85■□□□□ 0.93
Vti1bO88384 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Vti1bO88384 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vti1bO88384 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vti1bO88384 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vti1bO88384 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vti1bO88384 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vti1bO88384 Gm9812-201ENSMUST00000061934 968 ntBASIC20.84■□□□□ 0.93
Vti1bO88384 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
Vti1bO88384 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.84■□□□□ 0.93
Vti1bO88384 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vti1bO88384 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vti1bO88384 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vti1bO88384 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vti1bO88384 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vti1bO88384 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.83■□□□□ 0.93
Vti1bO88384 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vti1bO88384 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Vti1bO88384 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vti1bO88384 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.82■□□□□ 0.92
Vti1bO88384 Gm6311-201ENSMUST00000073790 878 ntBASIC20.82■□□□□ 0.92
Vti1bO88384 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vti1bO88384 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.81■□□□□ 0.92
Vti1bO88384 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vti1bO88384 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vti1bO88384 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Vti1bO88384 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vti1bO88384 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vti1bO88384 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Vti1bO88384 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vti1bO88384 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vti1bO88384 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vti1bO88384 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Vti1bO88384 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Vti1bO88384 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Vti1bO88384 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vti1bO88384 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Vti1bO88384 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vti1bO88384 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vti1bO88384 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vti1bO88384 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vti1bO88384 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Vti1bO88384 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.78■□□□□ 0.92
Vti1bO88384 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vti1bO88384 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Vti1bO88384 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.78■□□□□ 0.92
Vti1bO88384 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.78■□□□□ 0.92
Vti1bO88384 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vti1bO88384 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vti1bO88384 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms