Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC29.62■■■□□ 2.33
Ubr1O70481 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC29.62■■■□□ 2.33
Ubr1O70481 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Ubr1O70481 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
Ubr1O70481 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Ubr1O70481 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Ubr1O70481 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Ubr1O70481 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Ubr1O70481 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Ubr1O70481 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Ubr1O70481 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Ubr1O70481 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Ubr1O70481 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Ubr1O70481 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Ubr1O70481 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Ubr1O70481 Rps24-207ENSMUST00000224568 714 ntBASIC29.59■■■□□ 2.33
Ubr1O70481 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Ubr1O70481 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Ubr1O70481 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Ubr1O70481 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC29.59■■■□□ 2.33
Ubr1O70481 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC29.58■■■□□ 2.33
Ubr1O70481 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC29.58■■■□□ 2.33
Ubr1O70481 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
Ubr1O70481 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC29.58■■■□□ 2.33
Ubr1O70481 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Ubr1O70481 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Ubr1O70481 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC29.57■■■□□ 2.32
Ubr1O70481 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC29.57■■■□□ 2.32
Ubr1O70481 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC29.57■■■□□ 2.32
Ubr1O70481 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Ubr1O70481 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Ubr1O70481 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Ubr1O70481 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC29.56■■■□□ 2.32
Ubr1O70481 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
Ubr1O70481 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Ubr1O70481 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
Ubr1O70481 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC29.55■■■□□ 2.32
Ubr1O70481 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC29.54■■■□□ 2.32
Ubr1O70481 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Ubr1O70481 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Ubr1O70481 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Ubr1O70481 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Ubr1O70481 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Ubr1O70481 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Ubr1O70481 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Ubr1O70481 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
Ubr1O70481 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
Ubr1O70481 Gm45102-201ENSMUST00000207427 857 ntBASIC29.52■■■□□ 2.32
Ubr1O70481 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC29.5■■■□□ 2.31
Ubr1O70481 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC29.5■■■□□ 2.31
Ubr1O70481 Gm18755-201ENSMUST00000218030 1099 ntBASIC29.5■■■□□ 2.31
Ubr1O70481 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Ubr1O70481 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC29.5■■■□□ 2.31
Ubr1O70481 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Ubr1O70481 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC29.49■■■□□ 2.31
Ubr1O70481 Gm9959-201ENSMUST00000068277 390 ntBASIC29.49■■■□□ 2.31
Ubr1O70481 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Ubr1O70481 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
Ubr1O70481 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC29.49■■■□□ 2.31
Ubr1O70481 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
Ubr1O70481 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Ubr1O70481 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Ubr1O70481 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Ubr1O70481 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Ubr1O70481 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC29.48■■■□□ 2.31
Ubr1O70481 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Ubr1O70481 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC29.47■■■□□ 2.31
Ubr1O70481 Gm10232-201ENSMUST00000089221 720 ntBASIC29.47■■■□□ 2.31
Ubr1O70481 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC29.47■■■□□ 2.31
Ubr1O70481 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Ubr1O70481 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC29.47■■■□□ 2.31
Ubr1O70481 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
Ubr1O70481 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC29.46■■■□□ 2.31
Ubr1O70481 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC29.46■■■□□ 2.31
Ubr1O70481 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC29.46■■■□□ 2.31
Ubr1O70481 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Ubr1O70481 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC29.45■■■□□ 2.3
Ubr1O70481 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC29.44■■■□□ 2.3
Ubr1O70481 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC29.44■■■□□ 2.3
Ubr1O70481 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC29.43■■■□□ 2.3
Ubr1O70481 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC29.43■■■□□ 2.3
Ubr1O70481 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
Ubr1O70481 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC29.42■■■□□ 2.3
Ubr1O70481 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC29.42■■■□□ 2.3
Ubr1O70481 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC29.42■■■□□ 2.3
Ubr1O70481 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Ubr1O70481 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
Ubr1O70481 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Ubr1O70481 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
Ubr1O70481 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Ubr1O70481 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Ubr1O70481 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC29.4■■■□□ 2.3
Ubr1O70481 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC29.4■■■□□ 2.3
Ubr1O70481 Gm42501-201ENSMUST00000200220 1026 ntBASIC29.39■■■□□ 2.3
Ubr1O70481 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
Ubr1O70481 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC29.39■■■□□ 2.3
Ubr1O70481 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
Ubr1O70481 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC29.39■■■□□ 2.29
Ubr1O70481 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
Ubr1O70481 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms