Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pdlim3O70209 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20■□□□□ 0.79
Pdlim3O70209 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pdlim3O70209 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pdlim3O70209 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pdlim3O70209 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pdlim3O70209 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Pdlim3O70209 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pdlim3O70209 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.99■□□□□ 0.79
Pdlim3O70209 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pdlim3O70209 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pdlim3O70209 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pdlim3O70209 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Pdlim3O70209 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pdlim3O70209 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.98■□□□□ 0.79
Pdlim3O70209 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pdlim3O70209 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.98■□□□□ 0.79
Pdlim3O70209 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pdlim3O70209 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.97■□□□□ 0.79
Pdlim3O70209 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Pdlim3O70209 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pdlim3O70209 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pdlim3O70209 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pdlim3O70209 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Pdlim3O70209 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Pdlim3O70209 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pdlim3O70209 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pdlim3O70209 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Pdlim3O70209 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.96■□□□□ 0.79
Pdlim3O70209 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pdlim3O70209 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pdlim3O70209 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Pdlim3O70209 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Pdlim3O70209 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pdlim3O70209 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pdlim3O70209 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pdlim3O70209 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Pdlim3O70209 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
Pdlim3O70209 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Pdlim3O70209 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pdlim3O70209 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pdlim3O70209 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pdlim3O70209 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pdlim3O70209 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pdlim3O70209 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pdlim3O70209 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.92■□□□□ 0.78
Pdlim3O70209 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pdlim3O70209 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pdlim3O70209 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Pdlim3O70209 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.91■□□□□ 0.78
Pdlim3O70209 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pdlim3O70209 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pdlim3O70209 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Pdlim3O70209 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pdlim3O70209 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Pdlim3O70209 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pdlim3O70209 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.91■□□□□ 0.78
Pdlim3O70209 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pdlim3O70209 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pdlim3O70209 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pdlim3O70209 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pdlim3O70209 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pdlim3O70209 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
Pdlim3O70209 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Pdlim3O70209 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pdlim3O70209 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pdlim3O70209 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pdlim3O70209 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pdlim3O70209 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pdlim3O70209 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Pdlim3O70209 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.89■□□□□ 0.77
Pdlim3O70209 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.89■□□□□ 0.77
Pdlim3O70209 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.89■□□□□ 0.77
Pdlim3O70209 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pdlim3O70209 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.89■□□□□ 0.77
Pdlim3O70209 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pdlim3O70209 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.88■□□□□ 0.77
Pdlim3O70209 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Pdlim3O70209 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pdlim3O70209 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pdlim3O70209 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pdlim3O70209 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pdlim3O70209 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.88■□□□□ 0.77
Pdlim3O70209 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pdlim3O70209 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pdlim3O70209 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.87■□□□□ 0.77
Pdlim3O70209 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Pdlim3O70209 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pdlim3O70209 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pdlim3O70209 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pdlim3O70209 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.86■□□□□ 0.77
Pdlim3O70209 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pdlim3O70209 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pdlim3O70209 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pdlim3O70209 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pdlim3O70209 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pdlim3O70209 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pdlim3O70209 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pdlim3O70209 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.85■□□□□ 0.77
Pdlim3O70209 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms