Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Gm3727J3QM54 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gm3727J3QM54 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm3727J3QM54 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Gm3727J3QM54 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3727J3QM54 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Gm3727J3QM54 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3727J3QM54 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Gm3727J3QM54 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3727J3QM54 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3727J3QM54 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Gm3727J3QM54 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3727J3QM54 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3727J3QM54 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3727J3QM54 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3727J3QM54 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3727J3QM54 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3727J3QM54 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm3727J3QM54 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Gm3727J3QM54 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm3727J3QM54 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.79■□□□□ 0.6
Gm3727J3QM54 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Gm3727J3QM54 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Gm3727J3QM54 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm3727J3QM54 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.79■□□□□ 0.6
Gm3727J3QM54 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm3727J3QM54 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
Gm3727J3QM54 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm3727J3QM54 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm3727J3QM54 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm3727J3QM54 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gm3727J3QM54 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC18.78■□□□□ 0.6
Gm3727J3QM54 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gm3727J3QM54 Gm24804-201ENSMUST00000174982 85 ntBASIC18.78■□□□□ 0.6
Gm3727J3QM54 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm3727J3QM54 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm3727J3QM54 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18.78■□□□□ 0.6
Gm3727J3QM54 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm3727J3QM54 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.59
Gm3727J3QM54 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Gm3727J3QM54 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Gm3727J3QM54 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm3727J3QM54 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gm3727J3QM54 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm3727J3QM54 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gm3727J3QM54 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm3727J3QM54 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
Gm3727J3QM54 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm3727J3QM54 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Gm3727J3QM54 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Gm3727J3QM54 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm3727J3QM54 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm3727J3QM54 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm3727J3QM54 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm3727J3QM54 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gm3727J3QM54 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Gm3727J3QM54 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm3727J3QM54 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm3727J3QM54 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gm3727J3QM54 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm3727J3QM54 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm3727J3QM54 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm3727J3QM54 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm3727J3QM54 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm3727J3QM54 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm3727J3QM54 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Gm3727J3QM54 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm3727J3QM54 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm3727J3QM54 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm3727J3QM54 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.71■□□□□ 0.59
Gm3727J3QM54 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Gm3727J3QM54 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm3727J3QM54 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm3727J3QM54 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm3727J3QM54 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Gm3727J3QM54 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm3727J3QM54 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm3727J3QM54 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm3727J3QM54 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Gm3727J3QM54 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Gm3727J3QM54 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Gm3727J3QM54 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Gm3727J3QM54 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
Gm3727J3QM54 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Gm3727J3QM54 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Gm3727J3QM54 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm3727J3QM54 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.68■□□□□ 0.58
Gm3727J3QM54 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.68■□□□□ 0.58
Gm3727J3QM54 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Gm3727J3QM54 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm3727J3QM54 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC18.68■□□□□ 0.58
Gm3727J3QM54 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm3727J3QM54 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm3727J3QM54 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm3727J3QM54 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.67■□□□□ 0.58
Gm3727J3QM54 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Gm3727J3QM54 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm3727J3QM54 Notumos-201ENSMUST00000151998 2659 ntBASIC18.67■□□□□ 0.58
Gm3727J3QM54 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Gm3727J3QM54 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms