Protein–RNA interactions for Protein: B3F5L4

5830411N06Rik, RIKEN cDNA 5830411N06 gene, mousemouse

Predictions only

Length 1,112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5830411N06RikB3F5L4 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
5830411N06RikB3F5L4 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
5830411N06RikB3F5L4 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
5830411N06RikB3F5L4 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
5830411N06RikB3F5L4 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
5830411N06RikB3F5L4 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
5830411N06RikB3F5L4 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
5830411N06RikB3F5L4 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
5830411N06RikB3F5L4 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
5830411N06RikB3F5L4 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
5830411N06RikB3F5L4 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
5830411N06RikB3F5L4 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
5830411N06RikB3F5L4 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
5830411N06RikB3F5L4 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
5830411N06RikB3F5L4 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
5830411N06RikB3F5L4 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC22.9■■□□□ 1.26
5830411N06RikB3F5L4 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
5830411N06RikB3F5L4 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
5830411N06RikB3F5L4 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
5830411N06RikB3F5L4 AC153524.1-201ENSMUST00000220436 1935 ntBASIC22.9■■□□□ 1.26
5830411N06RikB3F5L4 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
5830411N06RikB3F5L4 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
5830411N06RikB3F5L4 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.9■■□□□ 1.26
5830411N06RikB3F5L4 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
5830411N06RikB3F5L4 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.26
5830411N06RikB3F5L4 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
5830411N06RikB3F5L4 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC22.89■■□□□ 1.25
5830411N06RikB3F5L4 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
5830411N06RikB3F5L4 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
5830411N06RikB3F5L4 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC22.89■■□□□ 1.25
5830411N06RikB3F5L4 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
5830411N06RikB3F5L4 Gm28731-201ENSMUST00000185564 1569 ntBASIC22.88■■□□□ 1.25
5830411N06RikB3F5L4 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
5830411N06RikB3F5L4 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
5830411N06RikB3F5L4 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC22.87■■□□□ 1.25
5830411N06RikB3F5L4 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
5830411N06RikB3F5L4 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC22.87■■□□□ 1.25
5830411N06RikB3F5L4 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC22.86■■□□□ 1.25
5830411N06RikB3F5L4 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
5830411N06RikB3F5L4 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
5830411N06RikB3F5L4 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
5830411N06RikB3F5L4 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
5830411N06RikB3F5L4 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
5830411N06RikB3F5L4 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
5830411N06RikB3F5L4 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC22.85■■□□□ 1.25
5830411N06RikB3F5L4 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
5830411N06RikB3F5L4 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC22.85■■□□□ 1.25
5830411N06RikB3F5L4 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
5830411N06RikB3F5L4 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
5830411N06RikB3F5L4 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
5830411N06RikB3F5L4 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
5830411N06RikB3F5L4 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
5830411N06RikB3F5L4 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
5830411N06RikB3F5L4 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC22.84■■□□□ 1.25
5830411N06RikB3F5L4 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC22.84■■□□□ 1.25
5830411N06RikB3F5L4 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
5830411N06RikB3F5L4 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC22.83■■□□□ 1.25
5830411N06RikB3F5L4 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
5830411N06RikB3F5L4 Gm5921-201ENSMUST00000075898 882 ntBASIC22.83■■□□□ 1.25
5830411N06RikB3F5L4 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
5830411N06RikB3F5L4 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
5830411N06RikB3F5L4 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
5830411N06RikB3F5L4 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
5830411N06RikB3F5L4 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
5830411N06RikB3F5L4 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
5830411N06RikB3F5L4 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
5830411N06RikB3F5L4 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
5830411N06RikB3F5L4 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
5830411N06RikB3F5L4 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
5830411N06RikB3F5L4 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
5830411N06RikB3F5L4 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
5830411N06RikB3F5L4 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
5830411N06RikB3F5L4 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
5830411N06RikB3F5L4 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
5830411N06RikB3F5L4 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
5830411N06RikB3F5L4 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
5830411N06RikB3F5L4 Gm6934-201ENSMUST00000194780 1905 ntBASIC22.79■■□□□ 1.24
5830411N06RikB3F5L4 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
5830411N06RikB3F5L4 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC22.79■■□□□ 1.24
5830411N06RikB3F5L4 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
5830411N06RikB3F5L4 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
5830411N06RikB3F5L4 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
5830411N06RikB3F5L4 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
5830411N06RikB3F5L4 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
5830411N06RikB3F5L4 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
5830411N06RikB3F5L4 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
5830411N06RikB3F5L4 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
5830411N06RikB3F5L4 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC22.77■■□□□ 1.24
5830411N06RikB3F5L4 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
5830411N06RikB3F5L4 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC22.77■■□□□ 1.24
5830411N06RikB3F5L4 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
5830411N06RikB3F5L4 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
5830411N06RikB3F5L4 AC117245.4-201ENSMUST00000217388 1646 ntBASIC22.76■■□□□ 1.23
5830411N06RikB3F5L4 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
5830411N06RikB3F5L4 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC22.76■■□□□ 1.23
5830411N06RikB3F5L4 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
5830411N06RikB3F5L4 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
5830411N06RikB3F5L4 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
5830411N06RikB3F5L4 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
5830411N06RikB3F5L4 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC22.75■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms