Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Gm7199-201ENSMUST00000118327 1485 ntBASIC22.35■■□□□ 1.17
Gm3854A0A1B0GSS6 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Gm3854A0A1B0GSS6 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Gm3854A0A1B0GSS6 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
Gm3854A0A1B0GSS6 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Gm3854A0A1B0GSS6 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Gm3854A0A1B0GSS6 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Gm3854A0A1B0GSS6 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Gm3854A0A1B0GSS6 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Gm3854A0A1B0GSS6 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Gm3854A0A1B0GSS6 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Gm3854A0A1B0GSS6 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Gm3854A0A1B0GSS6 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Gm3854A0A1B0GSS6 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Gm3854A0A1B0GSS6 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.32■■□□□ 1.16
Gm3854A0A1B0GSS6 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Gm3854A0A1B0GSS6 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC22.32■■□□□ 1.16
Gm3854A0A1B0GSS6 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC22.32■■□□□ 1.16
Gm3854A0A1B0GSS6 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC22.32■■□□□ 1.16
Gm3854A0A1B0GSS6 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Gm3854A0A1B0GSS6 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Gm3854A0A1B0GSS6 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Gm3854A0A1B0GSS6 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC22.31■■□□□ 1.16
Gm3854A0A1B0GSS6 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Gm3854A0A1B0GSS6 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Gm3854A0A1B0GSS6 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Gm3854A0A1B0GSS6 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Gm3854A0A1B0GSS6 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Gm3854A0A1B0GSS6 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Gm3854A0A1B0GSS6 Gm10232-201ENSMUST00000089221 720 ntBASIC22.29■■□□□ 1.16
Gm3854A0A1B0GSS6 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Gm3854A0A1B0GSS6 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Gm3854A0A1B0GSS6 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Gm3854A0A1B0GSS6 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Gm3854A0A1B0GSS6 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC22.28■■□□□ 1.16
Gm3854A0A1B0GSS6 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Gm3854A0A1B0GSS6 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Gm3854A0A1B0GSS6 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Gm3854A0A1B0GSS6 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Gm3854A0A1B0GSS6 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Gm3854A0A1B0GSS6 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Gm3854A0A1B0GSS6 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC22.26■■□□□ 1.15
Gm3854A0A1B0GSS6 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Gm3854A0A1B0GSS6 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Gm3854A0A1B0GSS6 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Gm3854A0A1B0GSS6 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Gm3854A0A1B0GSS6 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Gm3854A0A1B0GSS6 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Gm3854A0A1B0GSS6 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Gm3854A0A1B0GSS6 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Gm3854A0A1B0GSS6 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Gm3854A0A1B0GSS6 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Gm3854A0A1B0GSS6 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Gm3854A0A1B0GSS6 Etf1-202ENSMUST00000180351 108 ntBASIC22.24■■□□□ 1.15
Gm3854A0A1B0GSS6 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Gm3854A0A1B0GSS6 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Gm3854A0A1B0GSS6 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Gm3854A0A1B0GSS6 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Gm3854A0A1B0GSS6 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Gm3854A0A1B0GSS6 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Gm3854A0A1B0GSS6 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
Gm3854A0A1B0GSS6 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Gm3854A0A1B0GSS6 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Gm3854A0A1B0GSS6 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Gm3854A0A1B0GSS6 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Gm3854A0A1B0GSS6 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC22.21■■□□□ 1.15
Gm3854A0A1B0GSS6 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC22.21■■□□□ 1.15
Gm3854A0A1B0GSS6 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Gm3854A0A1B0GSS6 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Gm3854A0A1B0GSS6 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Gm3854A0A1B0GSS6 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Gm3854A0A1B0GSS6 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Gm3854A0A1B0GSS6 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Gm3854A0A1B0GSS6 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Gm3854A0A1B0GSS6 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Gm3854A0A1B0GSS6 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.19■■□□□ 1.14
Gm3854A0A1B0GSS6 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Gm3854A0A1B0GSS6 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Gm3854A0A1B0GSS6 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Gm3854A0A1B0GSS6 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC22.18■■□□□ 1.14
Gm3854A0A1B0GSS6 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Gm3854A0A1B0GSS6 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Gm3854A0A1B0GSS6 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Gm3854A0A1B0GSS6 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Gm3854A0A1B0GSS6 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Gm3854A0A1B0GSS6 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Gm3854A0A1B0GSS6 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Gm3854A0A1B0GSS6 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Gm3854A0A1B0GSS6 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Gm3854A0A1B0GSS6 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Gm3854A0A1B0GSS6 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Gm3854A0A1B0GSS6 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Gm3854A0A1B0GSS6 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC22.15■■□□□ 1.14
Gm3854A0A1B0GSS6 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC22.15■■□□□ 1.14
Gm3854A0A1B0GSS6 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Gm3854A0A1B0GSS6 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Gm3854A0A1B0GSS6 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Gm3854A0A1B0GSS6 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Gm3854A0A1B0GSS6 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Gm3854A0A1B0GSS6 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms