Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Trbv29A0A0G2LB96 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv29A0A0G2LB96 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.34■□□□□ 0.53
Trbv29A0A0G2LB96 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv29A0A0G2LB96 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv29A0A0G2LB96 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.34■□□□□ 0.53
Trbv29A0A0G2LB96 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv29A0A0G2LB96 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Trbv29A0A0G2LB96 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Trbv29A0A0G2LB96 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trbv29A0A0G2LB96 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trbv29A0A0G2LB96 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trbv29A0A0G2LB96 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Trbv29A0A0G2LB96 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trbv29A0A0G2LB96 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trbv29A0A0G2LB96 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv29A0A0G2LB96 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.32■□□□□ 0.52
Trbv29A0A0G2LB96 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv29A0A0G2LB96 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Trbv29A0A0G2LB96 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Trbv29A0A0G2LB96 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.32■□□□□ 0.52
Trbv29A0A0G2LB96 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
Trbv29A0A0G2LB96 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.32■□□□□ 0.52
Trbv29A0A0G2LB96 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv29A0A0G2LB96 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.32■□□□□ 0.52
Trbv29A0A0G2LB96 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trbv29A0A0G2LB96 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trbv29A0A0G2LB96 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.31■□□□□ 0.52
Trbv29A0A0G2LB96 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.31■□□□□ 0.52
Trbv29A0A0G2LB96 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trbv29A0A0G2LB96 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trbv29A0A0G2LB96 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trbv29A0A0G2LB96 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.3■□□□□ 0.52
Trbv29A0A0G2LB96 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Trbv29A0A0G2LB96 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv29A0A0G2LB96 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
Trbv29A0A0G2LB96 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.3■□□□□ 0.52
Trbv29A0A0G2LB96 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv29A0A0G2LB96 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Trbv29A0A0G2LB96 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.29■□□□□ 0.52
Trbv29A0A0G2LB96 Gm4799-201ENSMUST00000095396 657 ntBASIC18.29■□□□□ 0.52
Trbv29A0A0G2LB96 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.28■□□□□ 0.52
Trbv29A0A0G2LB96 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv29A0A0G2LB96 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv29A0A0G2LB96 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv29A0A0G2LB96 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trbv29A0A0G2LB96 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trbv29A0A0G2LB96 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trbv29A0A0G2LB96 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trbv29A0A0G2LB96 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trbv29A0A0G2LB96 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.27■□□□□ 0.52
Trbv29A0A0G2LB96 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trbv29A0A0G2LB96 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trbv29A0A0G2LB96 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trbv29A0A0G2LB96 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trbv29A0A0G2LB96 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Trbv29A0A0G2LB96 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.26■□□□□ 0.51
Trbv29A0A0G2LB96 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv29A0A0G2LB96 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Trbv29A0A0G2LB96 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.26■□□□□ 0.51
Trbv29A0A0G2LB96 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv29A0A0G2LB96 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv29A0A0G2LB96 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv29A0A0G2LB96 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Trbv29A0A0G2LB96 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv29A0A0G2LB96 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv29A0A0G2LB96 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv29A0A0G2LB96 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Trbv29A0A0G2LB96 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv29A0A0G2LB96 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Trbv29A0A0G2LB96 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv29A0A0G2LB96 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.25■□□□□ 0.51
Trbv29A0A0G2LB96 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Trbv29A0A0G2LB96 Gm9812-201ENSMUST00000061934 968 ntBASIC18.25■□□□□ 0.51
Trbv29A0A0G2LB96 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.25■□□□□ 0.51
Trbv29A0A0G2LB96 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv29A0A0G2LB96 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv29A0A0G2LB96 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.24■□□□□ 0.51
Trbv29A0A0G2LB96 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv29A0A0G2LB96 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.23■□□□□ 0.51
Trbv29A0A0G2LB96 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv29A0A0G2LB96 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv29A0A0G2LB96 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv29A0A0G2LB96 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv29A0A0G2LB96 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv29A0A0G2LB96 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv29A0A0G2LB96 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv29A0A0G2LB96 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv29A0A0G2LB96 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv29A0A0G2LB96 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv29A0A0G2LB96 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv29A0A0G2LB96 Gm8503-201ENSMUST00000118131 455 ntBASIC18.22■□□□□ 0.51
Trbv29A0A0G2LB96 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.22■□□□□ 0.51
Trbv29A0A0G2LB96 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.22■□□□□ 0.51
Trbv29A0A0G2LB96 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv29A0A0G2LB96 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv29A0A0G2LB96 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv29A0A0G2LB96 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Trbv29A0A0G2LB96 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv29A0A0G2LB96 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms