Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm45364-201ENSMUST00000210883 159 ntBASIC19.43■□□□□ 0.7
Trav15d-2-dv6d-2A0A0G2JGQ7 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav15d-2-dv6d-2A0A0G2JGQ7 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav15d-2-dv6d-2A0A0G2JGQ7 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trav15d-2-dv6d-2A0A0G2JGQ7 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav15d-2-dv6d-2A0A0G2JGQ7 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Trav15d-2-dv6d-2A0A0G2JGQ7 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trav15d-2-dv6d-2A0A0G2JGQ7 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav15d-2-dv6d-2A0A0G2JGQ7 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav15d-2-dv6d-2A0A0G2JGQ7 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Trav15d-2-dv6d-2A0A0G2JGQ7 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav15d-2-dv6d-2A0A0G2JGQ7 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav15d-2-dv6d-2A0A0G2JGQ7 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.41■□□□□ 0.7
Trav15d-2-dv6d-2A0A0G2JGQ7 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trav15d-2-dv6d-2A0A0G2JGQ7 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav15d-2-dv6d-2A0A0G2JGQ7 Terc-201ENSMUST00000082862 423 ntBASIC19.41■□□□□ 0.7
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav15d-2-dv6d-2A0A0G2JGQ7 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav15d-2-dv6d-2A0A0G2JGQ7 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav15d-2-dv6d-2A0A0G2JGQ7 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm11599-201ENSMUST00000118720 878 ntBASIC19.4■□□□□ 0.7
Trav15d-2-dv6d-2A0A0G2JGQ7 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav15d-2-dv6d-2A0A0G2JGQ7 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Trav15d-2-dv6d-2A0A0G2JGQ7 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.38■□□□□ 0.69
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Trav15d-2-dv6d-2A0A0G2JGQ7 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav15d-2-dv6d-2A0A0G2JGQ7 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav15d-2-dv6d-2A0A0G2JGQ7 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.37■□□□□ 0.69
Trav15d-2-dv6d-2A0A0G2JGQ7 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.37■□□□□ 0.69
Trav15d-2-dv6d-2A0A0G2JGQ7 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav15d-2-dv6d-2A0A0G2JGQ7 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav15d-2-dv6d-2A0A0G2JGQ7 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.36■□□□□ 0.69
Trav15d-2-dv6d-2A0A0G2JGQ7 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav15d-2-dv6d-2A0A0G2JGQ7 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav15d-2-dv6d-2A0A0G2JGQ7 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav15d-2-dv6d-2A0A0G2JGQ7 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.35■□□□□ 0.69
Trav15d-2-dv6d-2A0A0G2JGQ7 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trav15d-2-dv6d-2A0A0G2JGQ7 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav15d-2-dv6d-2A0A0G2JGQ7 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Trav15d-2-dv6d-2A0A0G2JGQ7 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav15d-2-dv6d-2A0A0G2JGQ7 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Trav15d-2-dv6d-2A0A0G2JGQ7 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav15d-2-dv6d-2A0A0G2JGQ7 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trav15d-2-dv6d-2A0A0G2JGQ7 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trav15d-2-dv6d-2A0A0G2JGQ7 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
Trav15d-2-dv6d-2A0A0G2JGQ7 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trav15d-2-dv6d-2A0A0G2JGQ7 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.33■□□□□ 0.68
Trav15d-2-dv6d-2A0A0G2JGQ7 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trav15d-2-dv6d-2A0A0G2JGQ7 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.33■□□□□ 0.68
Trav15d-2-dv6d-2A0A0G2JGQ7 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Trav15d-2-dv6d-2A0A0G2JGQ7 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trav15d-2-dv6d-2A0A0G2JGQ7 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav15d-2-dv6d-2A0A0G2JGQ7 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav15d-2-dv6d-2A0A0G2JGQ7 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav15d-2-dv6d-2A0A0G2JGQ7 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav15d-2-dv6d-2A0A0G2JGQ7 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav15d-2-dv6d-2A0A0G2JGQ7 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav15d-2-dv6d-2A0A0G2JGQ7 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav15d-2-dv6d-2A0A0G2JGQ7 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trav15d-2-dv6d-2A0A0G2JGQ7 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.31■□□□□ 0.68
Trav15d-2-dv6d-2A0A0G2JGQ7 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Trav15d-2-dv6d-2A0A0G2JGQ7 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav15d-2-dv6d-2A0A0G2JGQ7 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Trav15d-2-dv6d-2A0A0G2JGQ7 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav15d-2-dv6d-2A0A0G2JGQ7 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Trav15d-2-dv6d-2A0A0G2JGQ7 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trav15d-2-dv6d-2A0A0G2JGQ7 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav15d-2-dv6d-2A0A0G2JGQ7 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav15d-2-dv6d-2A0A0G2JGQ7 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav15d-2-dv6d-2A0A0G2JGQ7 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav15d-2-dv6d-2A0A0G2JGQ7 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.29■□□□□ 0.68
Trav15d-2-dv6d-2A0A0G2JGQ7 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav15d-2-dv6d-2A0A0G2JGQ7 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.29■□□□□ 0.68
Trav15d-2-dv6d-2A0A0G2JGQ7 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Trav15d-2-dv6d-2A0A0G2JGQ7 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.28■□□□□ 0.68
Trav15d-2-dv6d-2A0A0G2JGQ7 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.28■□□□□ 0.68
Trav15d-2-dv6d-2A0A0G2JGQ7 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav15d-2-dv6d-2A0A0G2JGQ7 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trav15d-2-dv6d-2A0A0G2JGQ7 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trav15d-2-dv6d-2A0A0G2JGQ7 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trav15d-2-dv6d-2A0A0G2JGQ7 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm22567-201ENSMUST00000175542 342 ntBASIC19.27■□□□□ 0.68
Trav15d-2-dv6d-2A0A0G2JGQ7 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.27■□□□□ 0.68
Trav15d-2-dv6d-2A0A0G2JGQ7 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trav15d-2-dv6d-2A0A0G2JGQ7 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trav15d-2-dv6d-2A0A0G2JGQ7 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms