Protein–RNA interactions for Protein: A0A0G2JFX6

Trav7-5, T cell receptor alpha variable 7-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-5A0A0G2JFX6 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav7-5A0A0G2JFX6 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.28■□□□□ 0.36
Trav7-5A0A0G2JFX6 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trav7-5A0A0G2JFX6 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav7-5A0A0G2JFX6 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav7-5A0A0G2JFX6 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav7-5A0A0G2JFX6 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Trav7-5A0A0G2JFX6 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav7-5A0A0G2JFX6 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.27■□□□□ 0.35
Trav7-5A0A0G2JFX6 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav7-5A0A0G2JFX6 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav7-5A0A0G2JFX6 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.26■□□□□ 0.35
Trav7-5A0A0G2JFX6 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav7-5A0A0G2JFX6 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Trav7-5A0A0G2JFX6 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav7-5A0A0G2JFX6 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav7-5A0A0G2JFX6 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav7-5A0A0G2JFX6 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav7-5A0A0G2JFX6 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.26■□□□□ 0.35
Trav7-5A0A0G2JFX6 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.26■□□□□ 0.35
Trav7-5A0A0G2JFX6 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav7-5A0A0G2JFX6 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Trav7-5A0A0G2JFX6 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Trav7-5A0A0G2JFX6 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav7-5A0A0G2JFX6 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav7-5A0A0G2JFX6 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav7-5A0A0G2JFX6 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav7-5A0A0G2JFX6 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav7-5A0A0G2JFX6 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.25■□□□□ 0.35
Trav7-5A0A0G2JFX6 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Trav7-5A0A0G2JFX6 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.24■□□□□ 0.35
Trav7-5A0A0G2JFX6 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav7-5A0A0G2JFX6 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.24■□□□□ 0.35
Trav7-5A0A0G2JFX6 Il17rd-202ENSMUST00000223942 2186 ntBASIC17.24■□□□□ 0.35
Trav7-5A0A0G2JFX6 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC17.24■□□□□ 0.35
Trav7-5A0A0G2JFX6 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC17.24■□□□□ 0.35
Trav7-5A0A0G2JFX6 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav7-5A0A0G2JFX6 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav7-5A0A0G2JFX6 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav7-5A0A0G2JFX6 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav7-5A0A0G2JFX6 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav7-5A0A0G2JFX6 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC17.23■□□□□ 0.35
Trav7-5A0A0G2JFX6 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.23■□□□□ 0.35
Trav7-5A0A0G2JFX6 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav7-5A0A0G2JFX6 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav7-5A0A0G2JFX6 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.23■□□□□ 0.35
Trav7-5A0A0G2JFX6 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav7-5A0A0G2JFX6 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav7-5A0A0G2JFX6 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav7-5A0A0G2JFX6 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav7-5A0A0G2JFX6 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav7-5A0A0G2JFX6 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav7-5A0A0G2JFX6 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav7-5A0A0G2JFX6 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav7-5A0A0G2JFX6 Gm14523-201ENSMUST00000117260 558 ntBASIC17.22■□□□□ 0.35
Trav7-5A0A0G2JFX6 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.22■□□□□ 0.35
Trav7-5A0A0G2JFX6 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.22■□□□□ 0.35
Trav7-5A0A0G2JFX6 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav7-5A0A0G2JFX6 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav7-5A0A0G2JFX6 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav7-5A0A0G2JFX6 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Trav7-5A0A0G2JFX6 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav7-5A0A0G2JFX6 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav7-5A0A0G2JFX6 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.21■□□□□ 0.35
Trav7-5A0A0G2JFX6 Gm12366-201ENSMUST00000121722 873 ntBASIC17.21■□□□□ 0.35
Trav7-5A0A0G2JFX6 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.21■□□□□ 0.35
Trav7-5A0A0G2JFX6 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.21■□□□□ 0.35
Trav7-5A0A0G2JFX6 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.21■□□□□ 0.35
Trav7-5A0A0G2JFX6 Gm5786-201ENSMUST00000085368 882 ntBASIC17.21■□□□□ 0.35
Trav7-5A0A0G2JFX6 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav7-5A0A0G2JFX6 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav7-5A0A0G2JFX6 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trav7-5A0A0G2JFX6 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.2■□□□□ 0.34
Trav7-5A0A0G2JFX6 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav7-5A0A0G2JFX6 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Trav7-5A0A0G2JFX6 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav7-5A0A0G2JFX6 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Trav7-5A0A0G2JFX6 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Trav7-5A0A0G2JFX6 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav7-5A0A0G2JFX6 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav7-5A0A0G2JFX6 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav7-5A0A0G2JFX6 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav7-5A0A0G2JFX6 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Trav7-5A0A0G2JFX6 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav7-5A0A0G2JFX6 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav7-5A0A0G2JFX6 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav7-5A0A0G2JFX6 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav7-5A0A0G2JFX6 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav7-5A0A0G2JFX6 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav7-5A0A0G2JFX6 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav7-5A0A0G2JFX6 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Trav7-5A0A0G2JFX6 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav7-5A0A0G2JFX6 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav7-5A0A0G2JFX6 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav7-5A0A0G2JFX6 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav7-5A0A0G2JFX6 Gm7332-201ENSMUST00000118351 454 ntBASIC17.17■□□□□ 0.34
Trav7-5A0A0G2JFX6 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav7-5A0A0G2JFX6 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav7-5A0A0G2JFX6 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav7-5A0A0G2JFX6 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms