Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13d-4A0A0G2JFX3 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13d-4A0A0G2JFX3 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13d-4A0A0G2JFX3 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13d-4A0A0G2JFX3 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13d-4A0A0G2JFX3 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13d-4A0A0G2JFX3 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13d-4A0A0G2JFX3 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13d-4A0A0G2JFX3 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13d-4A0A0G2JFX3 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13d-4A0A0G2JFX3 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC15.14■□□□□ 0.01
Trav13d-4A0A0G2JFX3 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav13d-4A0A0G2JFX3 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13d-4A0A0G2JFX3 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Trav13d-4A0A0G2JFX3 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13d-4A0A0G2JFX3 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav13d-4A0A0G2JFX3 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav13d-4A0A0G2JFX3 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trav13d-4A0A0G2JFX3 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav13d-4A0A0G2JFX3 Gm9939-201ENSMUST00000067161 1154 ntBASIC15.13■□□□□ 0.01
Trav13d-4A0A0G2JFX3 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav13d-4A0A0G2JFX3 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav13d-4A0A0G2JFX3 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav13d-4A0A0G2JFX3 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav13d-4A0A0G2JFX3 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trav13d-4A0A0G2JFX3 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13d-4A0A0G2JFX3 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13d-4A0A0G2JFX3 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13d-4A0A0G2JFX3 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13d-4A0A0G2JFX3 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13d-4A0A0G2JFX3 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13d-4A0A0G2JFX3 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trav13d-4A0A0G2JFX3 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trav13d-4A0A0G2JFX3 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav13d-4A0A0G2JFX3 Gm6821-201ENSMUST00000107540 542 ntBASIC15.11■□□□□ 0.01
Trav13d-4A0A0G2JFX3 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav13d-4A0A0G2JFX3 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav13d-4A0A0G2JFX3 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Trav13d-4A0A0G2JFX3 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav13d-4A0A0G2JFX3 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trav13d-4A0A0G2JFX3 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trav13d-4A0A0G2JFX3 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav13d-4A0A0G2JFX3 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trav13d-4A0A0G2JFX3 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav13d-4A0A0G2JFX3 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Trav13d-4A0A0G2JFX3 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13d-4A0A0G2JFX3 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC15.09■□□□□ 0.01
Trav13d-4A0A0G2JFX3 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13d-4A0A0G2JFX3 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13d-4A0A0G2JFX3 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC15.08■□□□□ 0.01
Trav13d-4A0A0G2JFX3 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav13d-4A0A0G2JFX3 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav13d-4A0A0G2JFX3 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trav13d-4A0A0G2JFX3 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC15.08■□□□□ 0.01
Trav13d-4A0A0G2JFX3 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Trav13d-4A0A0G2JFX3 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav13d-4A0A0G2JFX3 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav13d-4A0A0G2JFX3 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav13d-4A0A0G2JFX3 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav13d-4A0A0G2JFX3 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav13d-4A0A0G2JFX3 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav13d-4A0A0G2JFX3 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav13d-4A0A0G2JFX3 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav13d-4A0A0G2JFX3 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav13d-4A0A0G2JFX3 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13d-4A0A0G2JFX3 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13d-4A0A0G2JFX3 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13d-4A0A0G2JFX3 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13d-4A0A0G2JFX3 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13d-4A0A0G2JFX3 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trav13d-4A0A0G2JFX3 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav13d-4A0A0G2JFX3 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trav13d-4A0A0G2JFX3 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13d-4A0A0G2JFX3 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC15.06■□□□□ 0
Trav13d-4A0A0G2JFX3 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13d-4A0A0G2JFX3 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13d-4A0A0G2JFX3 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13d-4A0A0G2JFX3 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Trav13d-4A0A0G2JFX3 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav13d-4A0A0G2JFX3 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav13d-4A0A0G2JFX3 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav13d-4A0A0G2JFX3 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav13d-4A0A0G2JFX3 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Trav13d-4A0A0G2JFX3 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav13d-4A0A0G2JFX3 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav13d-4A0A0G2JFX3 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav13d-4A0A0G2JFX3 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav13d-4A0A0G2JFX3 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC15.04■□□□□ -0
Trav13d-4A0A0G2JFX3 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav13d-4A0A0G2JFX3 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC15.04■□□□□ -0
Trav13d-4A0A0G2JFX3 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trav13d-4A0A0G2JFX3 Gm6934-201ENSMUST00000194780 1905 ntBASIC15.04■□□□□ -0
Trav13d-4A0A0G2JFX3 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav13d-4A0A0G2JFX3 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav13d-4A0A0G2JFX3 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC15.03■□□□□ -0
Trav13d-4A0A0G2JFX3 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav13d-4A0A0G2JFX3 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav13d-4A0A0G2JFX3 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav13d-4A0A0G2JFX3 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav13d-4A0A0G2JFX3 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms