Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trbv12-1A0A0B4J1H0 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trbv12-1A0A0B4J1H0 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Trbv12-1A0A0B4J1H0 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Trbv12-1A0A0B4J1H0 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Trbv12-1A0A0B4J1H0 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trbv12-1A0A0B4J1H0 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trbv12-1A0A0B4J1H0 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trbv12-1A0A0B4J1H0 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trbv12-1A0A0B4J1H0 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.69■□□□□ 0.74
Trbv12-1A0A0B4J1H0 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trbv12-1A0A0B4J1H0 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trbv12-1A0A0B4J1H0 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.69■□□□□ 0.74
Trbv12-1A0A0B4J1H0 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trbv12-1A0A0B4J1H0 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Trbv12-1A0A0B4J1H0 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.68■□□□□ 0.74
Trbv12-1A0A0B4J1H0 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.68■□□□□ 0.74
Trbv12-1A0A0B4J1H0 Gm12366-201ENSMUST00000121722 873 ntBASIC19.68■□□□□ 0.74
Trbv12-1A0A0B4J1H0 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.68■□□□□ 0.74
Trbv12-1A0A0B4J1H0 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.68■□□□□ 0.74
Trbv12-1A0A0B4J1H0 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.68■□□□□ 0.74
Trbv12-1A0A0B4J1H0 Gm5786-201ENSMUST00000085368 882 ntBASIC19.68■□□□□ 0.74
Trbv12-1A0A0B4J1H0 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trbv12-1A0A0B4J1H0 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Trbv12-1A0A0B4J1H0 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trbv12-1A0A0B4J1H0 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.67■□□□□ 0.74
Trbv12-1A0A0B4J1H0 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trbv12-1A0A0B4J1H0 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trbv12-1A0A0B4J1H0 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trbv12-1A0A0B4J1H0 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trbv12-1A0A0B4J1H0 Gm7332-201ENSMUST00000118351 454 ntBASIC19.66■□□□□ 0.74
Trbv12-1A0A0B4J1H0 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trbv12-1A0A0B4J1H0 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Trbv12-1A0A0B4J1H0 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trbv12-1A0A0B4J1H0 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trbv12-1A0A0B4J1H0 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.66■□□□□ 0.74
Trbv12-1A0A0B4J1H0 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trbv12-1A0A0B4J1H0 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.65■□□□□ 0.74
Trbv12-1A0A0B4J1H0 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Trbv12-1A0A0B4J1H0 Gm22567-201ENSMUST00000175542 342 ntBASIC19.65■□□□□ 0.74
Trbv12-1A0A0B4J1H0 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trbv12-1A0A0B4J1H0 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trbv12-1A0A0B4J1H0 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.64■□□□□ 0.73
Trbv12-1A0A0B4J1H0 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.64■□□□□ 0.73
Trbv12-1A0A0B4J1H0 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trbv12-1A0A0B4J1H0 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trbv12-1A0A0B4J1H0 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trbv12-1A0A0B4J1H0 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trbv12-1A0A0B4J1H0 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trbv12-1A0A0B4J1H0 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trbv12-1A0A0B4J1H0 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trbv12-1A0A0B4J1H0 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Trbv12-1A0A0B4J1H0 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trbv12-1A0A0B4J1H0 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Trbv12-1A0A0B4J1H0 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trbv12-1A0A0B4J1H0 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trbv12-1A0A0B4J1H0 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.62■□□□□ 0.73
Trbv12-1A0A0B4J1H0 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trbv12-1A0A0B4J1H0 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trbv12-1A0A0B4J1H0 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trbv12-1A0A0B4J1H0 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.61■□□□□ 0.73
Trbv12-1A0A0B4J1H0 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.61■□□□□ 0.73
Trbv12-1A0A0B4J1H0 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trbv12-1A0A0B4J1H0 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trbv12-1A0A0B4J1H0 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trbv12-1A0A0B4J1H0 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trbv12-1A0A0B4J1H0 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trbv12-1A0A0B4J1H0 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trbv12-1A0A0B4J1H0 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trbv12-1A0A0B4J1H0 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trbv12-1A0A0B4J1H0 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Trbv12-1A0A0B4J1H0 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trbv12-1A0A0B4J1H0 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trbv12-1A0A0B4J1H0 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trbv12-1A0A0B4J1H0 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trbv12-1A0A0B4J1H0 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.59■□□□□ 0.73
Trbv12-1A0A0B4J1H0 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trbv12-1A0A0B4J1H0 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trbv12-1A0A0B4J1H0 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trbv12-1A0A0B4J1H0 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trbv12-1A0A0B4J1H0 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trbv12-1A0A0B4J1H0 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Trbv12-1A0A0B4J1H0 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trbv12-1A0A0B4J1H0 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.58■□□□□ 0.73
Trbv12-1A0A0B4J1H0 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trbv12-1A0A0B4J1H0 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trbv12-1A0A0B4J1H0 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trbv12-1A0A0B4J1H0 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trbv12-1A0A0B4J1H0 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trbv12-1A0A0B4J1H0 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trbv12-1A0A0B4J1H0 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trbv12-1A0A0B4J1H0 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Trbv12-1A0A0B4J1H0 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trbv12-1A0A0B4J1H0 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trbv12-1A0A0B4J1H0 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trbv12-1A0A0B4J1H0 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trbv12-1A0A0B4J1H0 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trbv12-1A0A0B4J1H0 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trbv12-1A0A0B4J1H0 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Trbv12-1A0A0B4J1H0 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms