Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv5A0A0B4J1G9 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC17.8■□□□□ 0.44
Trbv5A0A0B4J1G9 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv5A0A0B4J1G9 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Trbv5A0A0B4J1G9 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Trbv5A0A0B4J1G9 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv5A0A0B4J1G9 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Trbv5A0A0B4J1G9 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv5A0A0B4J1G9 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Trbv5A0A0B4J1G9 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv5A0A0B4J1G9 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv5A0A0B4J1G9 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv5A0A0B4J1G9 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Trbv5A0A0B4J1G9 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv5A0A0B4J1G9 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv5A0A0B4J1G9 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv5A0A0B4J1G9 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv5A0A0B4J1G9 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Trbv5A0A0B4J1G9 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv5A0A0B4J1G9 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
Trbv5A0A0B4J1G9 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trbv5A0A0B4J1G9 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.77■□□□□ 0.44
Trbv5A0A0B4J1G9 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trbv5A0A0B4J1G9 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.77■□□□□ 0.44
Trbv5A0A0B4J1G9 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
Trbv5A0A0B4J1G9 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trbv5A0A0B4J1G9 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trbv5A0A0B4J1G9 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Trbv5A0A0B4J1G9 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv5A0A0B4J1G9 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv5A0A0B4J1G9 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Trbv5A0A0B4J1G9 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Trbv5A0A0B4J1G9 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv5A0A0B4J1G9 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Trbv5A0A0B4J1G9 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Trbv5A0A0B4J1G9 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv5A0A0B4J1G9 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv5A0A0B4J1G9 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv5A0A0B4J1G9 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Trbv5A0A0B4J1G9 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv5A0A0B4J1G9 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv5A0A0B4J1G9 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
Trbv5A0A0B4J1G9 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv5A0A0B4J1G9 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv5A0A0B4J1G9 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv5A0A0B4J1G9 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv5A0A0B4J1G9 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Trbv5A0A0B4J1G9 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv5A0A0B4J1G9 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
Trbv5A0A0B4J1G9 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv5A0A0B4J1G9 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv5A0A0B4J1G9 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv5A0A0B4J1G9 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv5A0A0B4J1G9 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv5A0A0B4J1G9 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv5A0A0B4J1G9 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Trbv5A0A0B4J1G9 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC17.72■□□□□ 0.43
Trbv5A0A0B4J1G9 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv5A0A0B4J1G9 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv5A0A0B4J1G9 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv5A0A0B4J1G9 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.71■□□□□ 0.43
Trbv5A0A0B4J1G9 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv5A0A0B4J1G9 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv5A0A0B4J1G9 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv5A0A0B4J1G9 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC17.71■□□□□ 0.43
Trbv5A0A0B4J1G9 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv5A0A0B4J1G9 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv5A0A0B4J1G9 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv5A0A0B4J1G9 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.7■□□□□ 0.42
Trbv5A0A0B4J1G9 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv5A0A0B4J1G9 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv5A0A0B4J1G9 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.7■□□□□ 0.42
Trbv5A0A0B4J1G9 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv5A0A0B4J1G9 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv5A0A0B4J1G9 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Trbv5A0A0B4J1G9 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv5A0A0B4J1G9 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trbv5A0A0B4J1G9 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv5A0A0B4J1G9 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv5A0A0B4J1G9 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv5A0A0B4J1G9 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv5A0A0B4J1G9 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv5A0A0B4J1G9 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv5A0A0B4J1G9 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv5A0A0B4J1G9 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv5A0A0B4J1G9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv5A0A0B4J1G9 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv5A0A0B4J1G9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv5A0A0B4J1G9 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
Trbv5A0A0B4J1G9 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trbv5A0A0B4J1G9 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC17.67■□□□□ 0.42
Trbv5A0A0B4J1G9 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv5A0A0B4J1G9 Notumos-201ENSMUST00000151998 2659 ntBASIC17.67■□□□□ 0.42
Trbv5A0A0B4J1G9 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv5A0A0B4J1G9 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv5A0A0B4J1G9 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Trbv5A0A0B4J1G9 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv5A0A0B4J1G9 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Trbv5A0A0B4J1G9 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv5A0A0B4J1G9 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 106 ms